Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS10295 and HGI48_RS10300 are separated by 118 nucleotidesHGI48_RS10300 and HGI48_RS10305 are separated by 266 nucleotidesHGI48_RS10305 and HGI48_RS10310 are separated by 84 nucleotidesHGI48_RS10310 and HGI48_RS10315 are separated by 5 nucleotides HGI48_RS10295: HGI48_RS10295 - asparaginase, at 2,220,595 to 2,221,614 _RS10295 HGI48_RS10300: HGI48_RS10300 - signal peptide peptidase SppA, at 2,221,733 to 2,223,577 _RS10300 HGI48_RS10305: HGI48_RS10305 - NAD(P)H nitroreductase, at 2,223,844 to 2,224,395 _RS10305 HGI48_RS10310: HGI48_RS10310 - DNA topoisomerase III, at 2,224,480 to 2,226,405 _RS10310 HGI48_RS10315: HGI48_RS10315 - DUF1496 domain-containing protein, at 2,226,411 to 2,226,806 _RS10315
Group Condition HGI48_RS10295 HGI48_RS10300 HGI48_RS10305 HGI48_RS10310 HGI48_RS10315
control PDB +0.1 -0.4 -0.5 +0.0 -0.8
carbon source M9+polygalacturonate +0.1 -0.1 -0.2 -0.4 -0.9
plant Atlantic -0.2 -0.2 -0.6 +0.1 +0.1
carbon source M9+glycerol +0.3 -0.3 -0.6 -0.0 +0.1
carbon source M9+glycerol +0.2 +0.2 -0.3 -0.3 -0.3
plant Atlantic +0.1 -0.3 -0.0 +0.0 -0.2
carbon source M9+polygalacturonate +0.3 -0.4 -0.2 +0.0 -0.1
plant Norland -0.1 -0.2 +0.1 +0.0 -0.2
carbon source M9+glycerol +0.5 +0.2 -0.6 -0.1 -0.4
control PDB +0.1 -0.2 -0.1 -0.0 +0.1
carbon source M9+glycerol +0.2 -0.0 -0.0 -0.4 +0.1
plant Norland +0.1 +0.0 +0.1 +0.1 -0.3
carbon source M9+glycerol +0.3 +0.1 -0.2 +0.1 -0.3
carbon source M9+glycerol +0.1 -0.1 -0.2 +0.1 +0.2
plant Norland +0.0 -0.2 -0.3 +0.1 +0.4
plant Atlantic +0.2 -0.0 -0.1 +0.1 -0.1
control PDB -0.0 -0.2 -0.1 +0.1 +0.3
control LB +0.2 -0.2 -0.1 -0.0 +0.3
plant Upstate +0.1 -0.1 -0.2 +0.4 +0.1
carbon source M9+sucrose +0.4 +0.1 +0.2 +0.1 -0.4
control PDB +0.4 -0.2 -0.3 +0.2 +0.3
plant Upstate +0.1 +0.0 -0.3 +0.1 +0.5
plant Upstate +0.1 -0.2 -0.3 -0.0 +0.8
plant Atlantic -0.0 -0.2 +0.0 +0.7 +0.0
plant Atlantic +0.2 -0.1 +0.3 -0.1 +0.2
control PDB +0.3 -0.2 +0.1 +0.0 +0.4
plant Upstate -0.0 -0.2 +0.6 +0.1 +0.2
plant Atlantic +0.3 -0.1 +0.2 +0.4 +0.0
carbon source M9+sucrose +0.4 +0.3 -0.2 +0.2 +0.0
carbon source M9+sucrose +0.6 +0.1 +0.3 +0.2 +0.3
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