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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS10075 and HGI48_RS10080 are separated by 169 nucleotides
HGI48_RS10080 and HGI48_RS10085 are separated by 327 nucleotides
HGI48_RS10085 and HGI48_RS10090 are separated by 1 nucleotides
HGI48_RS10090 and HGI48_RS10095 are separated by 79 nucleotides
HGI48_RS10075: HGI48_RS10075 - MAPEG family protein, at 2,175,077 to 2,175,472
_RS10075
HGI48_RS10080: HGI48_RS10080 - DUF72 domain-containing protein, at 2,175,642 to 2,176,454
_RS10080
HGI48_RS10085: HGI48_RS10085 - aspartate--tRNA ligase, at 2,176,782 to 2,178,572
_RS10085
HGI48_RS10090: HGI48_RS10090 - dihydroneopterin triphosphate diphosphatase, at 2,178,574 to 2,179,017
_RS10090
HGI48_RS10095: HGI48_RS10095 - YebC/PmpR family DNA-binding transcriptional regulator, at 2,179,097 to 2,179,840
_RS10095
Group
Condition
HGI48
_RS10075
HGI48
_RS10080
HGI48
_RS10085
HGI48
_RS10090
HGI48
_RS10095
carbon source
M9+polygalacturonate
-1.4
+0.1
N.D.
-2.8
+0.6
carbon source
M9+glycerol
-0.7
-0.9
N.D.
-0.8
-0.2
carbon source
M9+polygalacturonate
-1.2
-0.2
N.D.
-2.3
+1.1
plant
Upstate
-1.2
-0.3
N.D.
-1.2
+0.1
plant
Upstate
-1.3
+0.1
N.D.
-1.4
+0.0
plant
Atlantic
-1.6
+0.1
N.D.
-1.2
+0.4
plant
Upstate
-1.3
-0.1
N.D.
-1.2
+0.4
plant
Norland
-0.9
-0.2
N.D.
-1.3
+0.3
control
LB
-1.0
-0.3
N.D.
-0.5
-0.3
plant
Norland
-0.8
-0.1
N.D.
-1.1
-0.0
control
PDB
-1.9
+0.2
N.D.
+0.0
-0.3
plant
Norland
-1.2
-0.6
N.D.
-0.7
+0.6
carbon source
M9+sucrose
-1.6
+0.2
N.D.
-0.5
+0.1
plant
Atlantic
-1.6
-0.1
N.D.
+0.3
-0.3
carbon source
M9+sucrose
-1.2
+0.2
N.D.
-1.3
+0.6
control
PDB
-1.6
+0.3
N.D.
-0.7
+0.4
control
PDB
-1.7
-0.0
N.D.
-0.2
+0.4
plant
Atlantic
-1.3
+0.4
N.D.
-0.4
-0.2
plant
Upstate
-1.4
+0.3
N.D.
-1.0
+0.6
plant
Norland
-1.1
-0.5
N.D.
-0.6
+0.8
control
PDB
-1.7
-0.0
N.D.
+0.1
+0.2
plant
Norland
-1.2
+0.1
N.D.
-0.6
+0.5
carbon source
M9+glycerol
-1.1
-0.6
N.D.
+0.3
+0.4
plant
Atlantic
-0.9
+0.4
N.D.
-1.2
+0.8
control
PDB
-1.7
+0.2
N.D.
+0.2
+0.3
control
PDB
-1.6
+0.7
N.D.
+0.1
-0.1
carbon source
M9+glycerol
-1.4
+0.1
N.D.
+0.0
+0.6
control
LB
-1.0
-0.5
N.D.
+0.7
+0.2
carbon source
M9+polygalacturonate
-0.9
-0.0
N.D.
-0.8
+1.2
plant
Upstate
-1.1
+0.5
N.D.
-0.1
+0.8
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