Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS10045 and HGI48_RS10050 are separated by 702 nucleotidesHGI48_RS10050 and HGI48_RS10055 are separated by 246 nucleotidesHGI48_RS10055 and HGI48_RS10060 are separated by 290 nucleotidesHGI48_RS10060 and HGI48_RS10065 are separated by 98 nucleotides HGI48_RS10045: HGI48_RS10045 - arginine--tRNA ligase, at 2,168,541 to 2,170,271 _RS10045 HGI48_RS10050: HGI48_RS10050 - VOC family protein, at 2,170,974 to 2,171,546 _RS10050 HGI48_RS10055: HGI48_RS10055 - copper homeostasis protein CutC, at 2,171,793 to 2,172,557 _RS10055 HGI48_RS10060: HGI48_RS10060 - hypothetical protein, at 2,172,848 to 2,173,144 _RS10060 HGI48_RS10065: HGI48_RS10065 - tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB, at 2,173,243 to 2,174,214 _RS10065
Group Condition HGI48_RS10045 HGI48_RS10050 HGI48_RS10055 HGI48_RS10060 HGI48_RS10065
control PDB N.D. -1.4 -0.1 -0.5 -0.1
plant Norland N.D. -0.9 +0.2 +0.4 -0.7
control LB N.D. -0.6 -0.0 -0.1 -0.3
plant Atlantic N.D. -2.6 +0.5 +0.3 +0.9
plant Norland N.D. -1.2 +0.4 +0.1 -0.1
control PDB N.D. -0.4 +0.1 -0.1 -0.4
control PDB N.D. -0.6 +0.2 +0.1 -0.3
control PDB N.D. +0.2 +0.1 -0.7 +0.2
plant Atlantic N.D. -0.8 +0.4 +0.6 -0.1
plant Atlantic N.D. -0.6 +0.5 -0.1 +0.4
plant Norland N.D. -0.1 +0.1 +0.7 -0.3
plant Upstate N.D. -0.6 +0.4 +0.4 +0.2
carbon source M9+glycerol N.D. -0.8 +0.1 +0.1 +1.0
carbon source M9+glycerol N.D. -0.4 +0.1 +0.6 +0.2
plant Norland N.D. -0.3 +0.2 +0.4 +0.2
carbon source M9+glycerol N.D. -0.5 +0.1 +0.3 +0.7
carbon source M9+glycerol N.D. -0.3 +0.5 -0.1 +0.6
carbon source M9+sucrose N.D. +0.1 -0.1 -0.9 +1.6
plant Atlantic N.D. -0.0 +0.7 +0.6 -0.6
plant Norland N.D. +0.4 +0.7 +0.3 -0.7
plant Upstate N.D. -0.1 -0.1 +0.6 +0.3
carbon source M9+polygalacturonate N.D. +0.0 +0.5 -0.7 +1.0
control PDB N.D. +0.6 -0.1 +0.1 +0.3
plant Upstate N.D. +0.3 +0.3 +0.2 +0.4
carbon source M9+sucrose N.D. -0.5 -0.1 +0.4 +1.6
carbon source M9+polygalacturonate N.D. +0.4 +0.6 -0.8 +1.4
carbon source M9+sucrose N.D. +1.0 +0.2 +0.1 +0.4
carbon source M9+polygalacturonate N.D. +1.3 +0.2 -0.8 +1.0
plant Upstate N.D. +0.5 +0.1 +1.2 -0.0
carbon source M9+glycerol N.D. +0.5 +0.3 +0.1 +1.0
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