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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS09975 and HGI48_RS09980 are separated by 272 nucleotides
HGI48_RS09980 and HGI48_RS09985 are separated by 45 nucleotides
HGI48_RS09985 and HGI48_RS09990 are separated by 30 nucleotides
HGI48_RS09990 and HGI48_RS09995 are separated by 135 nucleotides
HGI48_RS09975: HGI48_RS09975 - tRNA-Ser, at 2,156,317 to 2,156,406
_RS09975
HGI48_RS09980: HGI48_RS09980 - phosphatase, at 2,156,679 to 2,157,416
_RS09980
HGI48_RS09985: HGI48_RS09985 - molecular chaperone, at 2,157,462 to 2,158,043
_RS09985
HGI48_RS09990: HGI48_RS09990 - lipoprotein, at 2,158,074 to 2,158,637
_RS09990
HGI48_RS09995: HGI48_RS09995 - glutaredoxin 2, at 2,158,773 to 2,159,420
_RS09995
Group
Condition
HGI48
_RS09975
HGI48
_RS09980
HGI48
_RS09985
HGI48
_RS09990
HGI48
_RS09995
carbon source
M9+polygalacturonate
N.D.
-0.2
-0.7
-0.2
-0.4
plant
Atlantic
N.D.
+0.1
-0.6
-0.9
+0.2
carbon source
M9+glycerol
N.D.
-0.2
+0.2
-0.2
-0.9
carbon source
M9+glycerol
N.D.
-0.2
-0.1
-0.4
-0.3
control
PDB
N.D.
-0.4
-0.5
-0.1
+0.1
carbon source
M9+glycerol
N.D.
-0.5
+0.5
-0.4
-0.3
plant
Upstate
N.D.
+0.0
-0.2
-0.2
-0.3
carbon source
M9+sucrose
N.D.
-0.2
-0.2
+0.0
-0.3
carbon source
M9+glycerol
N.D.
-0.2
-0.1
-0.1
-0.2
plant
Upstate
N.D.
-0.2
-0.2
+0.1
-0.4
plant
Norland
N.D.
+0.0
-0.4
-0.1
-0.1
control
PDB
N.D.
-0.1
-0.4
-0.2
+0.0
carbon source
M9+polygalacturonate
N.D.
-0.0
-0.1
-0.3
+0.0
plant
Atlantic
N.D.
-0.3
-0.2
+0.0
+0.0
plant
Upstate
N.D.
-0.2
+0.1
-0.2
-0.2
carbon source
M9+glycerol
N.D.
-0.1
-0.1
-0.3
+0.1
control
PDB
N.D.
-0.3
-0.0
-0.3
+0.3
plant
Norland
N.D.
-0.1
+0.2
-0.1
-0.2
carbon source
M9+sucrose
N.D.
-0.5
+0.1
+0.1
+0.1
plant
Atlantic
N.D.
+0.3
+0.2
-0.6
-0.1
plant
Upstate
N.D.
-0.3
+0.1
-0.1
+0.2
control
PDB
N.D.
-0.0
+0.3
-0.1
-0.3
plant
Upstate
N.D.
+0.0
-0.3
-0.2
+0.4
carbon source
M9+sucrose
N.D.
-0.3
+0.2
-0.0
+0.3
plant
Atlantic
N.D.
-0.3
+0.1
+0.3
+0.1
plant
Atlantic
N.D.
+0.3
+0.1
-0.3
+0.1
control
LB
N.D.
+0.0
+0.2
-0.2
+0.2
control
LB
N.D.
+0.2
+0.2
-0.2
+0.1
carbon source
M9+polygalacturonate
N.D.
-0.1
-0.1
+0.4
+0.2
plant
Norland
N.D.
+0.2
+0.2
+0.1
-0.1
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