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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS09890 and HGI48_RS09895 overlap by 20 nucleotides
HGI48_RS09895 and HGI48_RS09900 overlap by 4 nucleotides
HGI48_RS09900 and HGI48_RS09905 are separated by 182 nucleotides
HGI48_RS09905 and HGI48_RS09910 are separated by 100 nucleotides
HGI48_RS09890: HGI48_RS09890 - chromosome partition protein MukF, at 2,136,579 to 2,137,901
_RS09890
HGI48_RS09895: HGI48_RS09895 - chromosome partition protein MukE, at 2,137,882 to 2,138,604
_RS09895
HGI48_RS09900: HGI48_RS09900 - chromosome partition protein MukB, at 2,138,601 to 2,143,040
_RS09900
HGI48_RS09905: HGI48_RS09905 - FAD-dependent oxidoreductase, at 2,143,223 to 2,144,533
_RS09905
HGI48_RS09910: HGI48_RS09910 - cyanophycin synthetase, at 2,144,634 to 2,145,671
_RS09910
Group
Condition
HGI48
_RS09890
HGI48
_RS09895
HGI48
_RS09900
HGI48
_RS09905
HGI48
_RS09910
plant
Atlantic
N.D.
N.D.
N.D.
-0.2
-0.5
control
PDB
N.D.
N.D.
N.D.
-0.2
-0.5
plant
Atlantic
N.D.
N.D.
N.D.
-0.3
-0.3
plant
Upstate
N.D.
N.D.
N.D.
-0.2
-0.4
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.4
-0.1
plant
Norland
N.D.
N.D.
N.D.
-0.1
-0.4
plant
Upstate
N.D.
N.D.
N.D.
-0.2
-0.2
control
PDB
N.D.
N.D.
N.D.
-0.1
-0.3
plant
Atlantic
N.D.
N.D.
N.D.
+0.1
-0.4
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.3
-0.1
control
LB
N.D.
N.D.
N.D.
-0.2
-0.1
plant
Norland
N.D.
N.D.
N.D.
+0.1
-0.4
control
PDB
N.D.
N.D.
N.D.
-0.1
-0.2
plant
Norland
N.D.
N.D.
N.D.
+0.0
-0.3
plant
Upstate
N.D.
N.D.
N.D.
+0.0
-0.3
carbon source
M9+glycerol
N.D.
N.D.
N.D.
-0.4
+0.1
plant
Norland
N.D.
N.D.
N.D.
-0.1
-0.1
plant
Atlantic
N.D.
N.D.
N.D.
+0.0
-0.3
control
PDB
N.D.
N.D.
N.D.
-0.0
-0.2
control
LB
N.D.
N.D.
N.D.
+0.1
-0.2
carbon source
M9+sucrose
N.D.
N.D.
N.D.
-0.2
+0.0
control
PDB
N.D.
N.D.
N.D.
+0.1
-0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
+0.0
-0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
+0.2
-0.2
plant
Norland
N.D.
N.D.
N.D.
+0.1
-0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
+0.2
-0.2
plant
Atlantic
N.D.
N.D.
N.D.
+0.1
-0.1
plant
Norland
N.D.
N.D.
N.D.
-0.1
+0.2
plant
Atlantic
N.D.
N.D.
N.D.
+0.0
+0.2
plant
Upstate
N.D.
N.D.
N.D.
-0.0
+0.3
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