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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS09725 and HGI48_RS09730 are separated by 6 nucleotides
HGI48_RS09730 and HGI48_RS09735 overlap by 1 nucleotides
HGI48_RS09735 and HGI48_RS09740 are separated by 14 nucleotides
HGI48_RS09740 and HGI48_RS09745 overlap by 4 nucleotides
HGI48_RS09725: HGI48_RS09725 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 2,100,415 to 2,101,152
_RS09725
HGI48_RS09730: HGI48_RS09730 - imidazole glycerol phosphate synthase subunit HisH, at 2,101,159 to 2,101,749
_RS09730
HGI48_RS09735: HGI48_RS09735 - bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB, at 2,101,749 to 2,102,816
_RS09735
HGI48_RS09740: HGI48_RS09740 - histidinol-phosphate transaminase, at 2,102,831 to 2,103,901
_RS09740
HGI48_RS09745: HGI48_RS09745 - histidinol dehydrogenase, at 2,103,898 to 2,105,208
_RS09745
Group
Condition
HGI48
_RS09725
HGI48
_RS09730
HGI48
_RS09735
HGI48
_RS09740
HGI48
_RS09745
carbon source
M9+polygalacturonate
N.D.
-5.9
-3.2
-3.6
-0.9
carbon source
M9+sucrose
N.D.
-4.6
-1.7
-3.4
-4.0
carbon source
M9+polygalacturonate
N.D.
-4.6
-3.4
-2.9
-2.0
carbon source
M9+glycerol
N.D.
-3.2
-2.8
-2.8
-1.2
carbon source
M9+sucrose
N.D.
-3.5
-1.4
-4.0
-1.0
carbon source
M9+polygalacturonate
N.D.
-3.1
-3.2
-3.1
-0.6
carbon source
M9+sucrose
N.D.
-3.3
-2.8
-2.0
-1.1
carbon source
M9+glycerol
N.D.
-2.0
-1.7
-3.2
-1.6
carbon source
M9+glycerol
N.D.
-1.6
-1.9
-3.1
-1.7
carbon source
M9+glycerol
N.D.
-2.2
-2.8
-2.2
-1.0
carbon source
M9+glycerol
N.D.
-2.0
-1.4
-2.1
-1.1
carbon source
M9+glycerol
N.D.
-1.1
-1.1
-2.2
-0.8
control
PDB
N.D.
-1.1
-1.6
-1.7
-0.6
control
PDB
N.D.
-1.6
-1.5
-1.1
-0.9
control
PDB
N.D.
-1.2
-1.5
-0.9
-0.5
plant
Upstate
N.D.
-0.8
-1.0
-0.7
-1.5
plant
Upstate
N.D.
-0.6
-1.3
-0.8
-1.2
plant
Upstate
N.D.
-1.1
-0.5
-1.0
-1.2
plant
Atlantic
N.D.
-0.6
-0.5
-0.9
-1.2
control
PDB
N.D.
-0.8
-0.8
-0.6
-0.8
plant
Norland
N.D.
-0.6
-0.5
-0.1
-1.8
plant
Norland
N.D.
-0.5
-1.0
-0.2
-1.2
plant
Norland
N.D.
-1.3
-0.0
-0.3
-1.2
plant
Norland
N.D.
-0.7
-0.3
-0.7
-1.0
control
LB
N.D.
-0.7
-0.4
-0.4
-1.1
control
PDB
N.D.
-1.0
-0.8
-0.1
-0.6
plant
Upstate
N.D.
-0.7
-0.6
-0.2
-1.0
plant
Atlantic
N.D.
-0.7
-1.8
+0.3
-0.1
control
LB
N.D.
-0.5
-0.1
-0.8
-0.9
plant
Atlantic
N.D.
-0.5
+0.3
+0.4
-2.3
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