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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS09640 and HGI48_RS09645 are separated by 102 nucleotides
HGI48_RS09645 and HGI48_RS09650 are separated by 150 nucleotides
HGI48_RS09650 and HGI48_RS09655 are separated by 25 nucleotides
HGI48_RS09655 and HGI48_RS09660 are separated by 596 nucleotides
HGI48_RS09640: HGI48_RS09640 - MBL fold metallo-hydrolase, at 2,078,679 to 2,079,554
_RS09640
HGI48_RS09645: HGI48_RS09645 - LysR family transcriptional regulator, at 2,079,657 to 2,080,565
_RS09645
HGI48_RS09650: HGI48_RS09650 - MFS transporter, at 2,080,716 to 2,081,864
_RS09650
HGI48_RS09655: HGI48_RS09655 - LysR family transcriptional regulator, at 2,081,890 to 2,082,819
_RS09655
HGI48_RS09660: HGI48_RS09660 - pyruvate formate lyase 1-activating protein, at 2,083,416 to 2,084,156
_RS09660
Group
Condition
HGI48
_RS09640
HGI48
_RS09645
HGI48
_RS09650
HGI48
_RS09655
HGI48
_RS09660
plant
Atlantic
-0.9
-0.3
-0.0
-0.3
-0.7
plant
Atlantic
-0.3
+0.0
-0.1
-0.9
-0.2
plant
Upstate
-0.2
-0.4
-0.0
+0.1
-0.4
plant
Upstate
-0.0
-0.3
-0.1
-0.0
-0.4
plant
Upstate
-0.0
-0.1
-0.1
-0.1
-0.5
plant
Norland
-0.2
+0.1
-0.1
-0.2
-0.4
carbon source
M9+polygalacturonate
-0.4
-0.5
+0.0
-0.0
+0.1
plant
Atlantic
+0.1
+0.0
-0.2
-0.0
-0.6
plant
Atlantic
-0.0
+0.2
-0.4
+0.1
-0.5
plant
Norland
+0.0
+0.0
-0.0
-0.1
-0.6
plant
Norland
+0.0
+0.0
+0.1
-0.1
-0.6
plant
Norland
-0.0
+0.3
-0.2
-0.2
-0.5
carbon source
M9+glycerol
-0.2
+0.1
-0.1
-0.2
-0.1
plant
Atlantic
+0.1
+0.2
-0.0
-0.2
-0.5
carbon source
M9+glycerol
+0.2
+0.2
-0.2
-0.1
-0.3
plant
Norland
+0.1
+0.1
+0.0
+0.1
-0.5
carbon source
M9+glycerol
+0.2
+0.0
-0.2
-0.1
-0.3
plant
Norland
-0.0
+0.2
-0.0
+0.1
-0.4
carbon source
M9+polygalacturonate
-0.1
-0.2
-0.1
+0.0
+0.3
control
PDB
-0.3
-0.1
+0.1
-0.0
+0.3
control
LB
+0.2
+0.1
+0.0
-0.1
-0.2
plant
Upstate
-0.3
+0.2
-0.0
+0.3
-0.0
control
PDB
+0.2
+0.0
-0.1
-0.2
+0.2
carbon source
M9+glycerol
+0.1
+0.0
+0.1
-0.3
+0.1
control
PDB
-0.2
-0.1
+0.2
-0.1
+0.4
carbon source
M9+glycerol
+0.2
+0.1
-0.2
+0.2
+0.1
control
PDB
-0.1
+0.2
+0.2
-0.1
+0.2
control
PDB
+0.1
+0.5
-0.1
-0.2
+0.4
plant
Atlantic
+0.1
+0.1
-0.2
+0.6
+0.3
control
PDB
+0.5
+0.1
+0.0
+0.0
+0.3
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