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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS09625 and HGI48_RS09630 are separated by 291 nucleotides
HGI48_RS09630 and HGI48_RS09635 are separated by 145 nucleotides
HGI48_RS09635 and HGI48_RS09640 are separated by 281 nucleotides
HGI48_RS09640 and HGI48_RS09645 are separated by 102 nucleotides
HGI48_RS09625: HGI48_RS09625 - serine--tRNA ligase, at 2,075,406 to 2,076,701
_RS09625
HGI48_RS09630: HGI48_RS09630 - Tat proofreading chaperone DmsD, at 2,076,993 to 2,077,607
_RS09630
HGI48_RS09635: HGI48_RS09635 - DsbA family protein, at 2,077,753 to 2,078,397
_RS09635
HGI48_RS09640: HGI48_RS09640 - MBL fold metallo-hydrolase, at 2,078,679 to 2,079,554
_RS09640
HGI48_RS09645: HGI48_RS09645 - LysR family transcriptional regulator, at 2,079,657 to 2,080,565
_RS09645
Group
Condition
HGI48
_RS09625
HGI48
_RS09630
HGI48
_RS09635
HGI48
_RS09640
HGI48
_RS09645
plant
Atlantic
N.D.
-0.7
-0.2
-0.9
-0.3
plant
Upstate
N.D.
-0.8
-0.0
-0.2
-0.4
carbon source
M9+glycerol
N.D.
-1.0
-0.1
+0.2
+0.1
carbon source
M9+polygalacturonate
N.D.
+0.5
-0.3
-0.4
-0.5
carbon source
M9+sucrose
N.D.
-0.3
-0.3
+0.1
-0.2
plant
Upstate
N.D.
-0.1
-0.4
-0.3
+0.2
carbon source
M9+glycerol
N.D.
-0.7
-0.0
+0.1
+0.0
plant
Atlantic
N.D.
-0.3
-0.3
-0.0
+0.2
carbon source
M9+polygalacturonate
N.D.
-0.3
+0.1
-0.1
-0.2
plant
Norland
N.D.
-0.5
+0.2
-0.2
+0.1
carbon source
M9+sucrose
N.D.
-0.3
-0.4
+0.2
+0.1
carbon source
M9+sucrose
N.D.
-0.1
-0.3
-0.2
+0.3
carbon source
M9+glycerol
N.D.
-0.5
-0.1
+0.2
+0.2
plant
Norland
N.D.
-0.1
-0.4
-0.0
+0.2
control
PDB
N.D.
-0.2
-0.1
-0.1
+0.2
control
PDB
N.D.
+0.2
-0.1
-0.2
-0.1
plant
Upstate
N.D.
+0.3
-0.2
-0.0
-0.3
plant
Atlantic
N.D.
-0.3
+0.1
+0.1
+0.0
plant
Atlantic
N.D.
+0.3
-0.2
-0.3
+0.0
control
LB
N.D.
+0.0
-0.3
-0.0
+0.2
plant
Norland
N.D.
-0.1
-0.2
-0.0
+0.3
control
PDB
N.D.
+0.5
+0.0
-0.3
-0.1
carbon source
M9+glycerol
N.D.
+0.1
+0.1
-0.2
+0.1
carbon source
M9+glycerol
N.D.
+0.1
-0.2
+0.2
+0.0
control
PDB
N.D.
+0.1
-0.3
+0.1
+0.5
plant
Atlantic
N.D.
+0.2
-0.1
+0.1
+0.2
control
LB
N.D.
+0.3
+0.2
+0.2
-0.2
plant
Atlantic
N.D.
-0.6
+0.9
+0.1
+0.1
control
PDB
N.D.
+0.2
+0.3
+0.2
+0.0
control
PDB
N.D.
+0.8
+0.2
+0.5
+0.1
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HGI48_RS09635
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