Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS09380 and HGI48_RS09385 are separated by 249 nucleotidesHGI48_RS09385 and HGI48_RS09390 are separated by 148 nucleotidesHGI48_RS09390 and HGI48_RS09395 overlap by 4 nucleotidesHGI48_RS09395 and HGI48_RS09400 are separated by 189 nucleotides HGI48_RS09380: HGI48_RS09380 - Tar ligand binding domain-containing protein, at 2,019,633 to 2,021,318 _RS09380 HGI48_RS09385: HGI48_RS09385 - GTP cyclohydrolase I FolE, at 2,021,568 to 2,022,236 _RS09385 HGI48_RS09390: HGI48_RS09390 - DUF418 family protein, at 2,022,385 to 2,023,536 _RS09390 HGI48_RS09395: HGI48_RS09395 - outer membrane permeability protein SanA, at 2,023,533 to 2,024,285 _RS09395 HGI48_RS09400: HGI48_RS09400 - 30S ribosomal protein S12 methylthiotransferase RimO, at 2,024,475 to 2,025,878 _RS09400
Group Condition HGI48_RS09380 HGI48_RS09385 HGI48_RS09390 HGI48_RS09395 HGI48_RS09400
plant Norland -0.2 N.D. -0.1 -0.1 -0.3
plant Norland -0.2 N.D. -0.2 +0.1 -0.2
plant Norland -0.1 N.D. -0.2 +0.1 -0.3
plant Upstate -0.4 N.D. +0.1 +0.0 -0.2
plant Atlantic +0.2 N.D. -0.3 -0.6 +0.2
plant Norland -0.2 N.D. -0.1 +0.1 -0.2
control LB +0.1 N.D. -0.2 -0.4 +0.1
plant Atlantic -0.1 N.D. -0.1 +0.1 -0.2
control LB -0.2 N.D. -0.1 -0.1 +0.2
control LB -0.2 N.D. -0.2 +0.2 +0.1
plant Atlantic +0.2 N.D. -0.2 +0.1 -0.0
carbon source M9+glycerol +0.2 N.D. -0.7 +1.0 -0.2
plant Atlantic +0.1 N.D. +0.3 +0.2 -0.3
carbon source M9+sucrose -0.2 N.D. -0.2 +0.7 +0.1
carbon source M9+glycerol -0.1 N.D. -0.2 +0.7 +0.0
carbon source M9+sucrose +0.1 N.D. +0.0 +0.5 -0.1
control PDB -0.3 N.D. -0.1 +0.8 +0.0
carbon source M9+glycerol +0.1 N.D. -0.3 +1.0 -0.3
control PDB -0.2 N.D. -0.1 +1.0 -0.0
control PDB -0.1 N.D. +0.0 +1.1 -0.3
carbon source M9+glycerol +0.3 N.D. -0.2 +0.6 +0.1
control PDB -0.1 N.D. -0.0 +0.8 +0.1
carbon source M9+sucrose +0.3 N.D. +0.1 +0.8 -0.3
control PDB -0.2 N.D. -0.1 +1.1 +0.1
carbon source M9+glycerol +0.2 N.D. -0.0 +0.8 -0.0
control PDB -0.1 N.D. +0.0 +1.0 +0.2
carbon source M9+polygalacturonate -0.2 N.D. -0.0 +1.6 -0.1
carbon source M9+glycerol +0.1 N.D. +0.1 +1.1 +0.1
carbon source M9+polygalacturonate +0.0 N.D. +0.1 +1.3 +0.0
carbon source M9+polygalacturonate +0.1 N.D. +0.2 +1.9 -0.1
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HGI48_RS09380
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HGI48_RS09385
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HGI48_RS09400
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