Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS09265 and HGI48_RS09270 are separated by 16 nucleotidesHGI48_RS09270 and HGI48_RS09275 are separated by 68 nucleotidesHGI48_RS09275 and HGI48_RS09280 are separated by 131 nucleotidesHGI48_RS09280 and HGI48_RS09285 are separated by 104 nucleotides HGI48_RS09265: HGI48_RS09265 - 1-phosphofructokinase, at 1,988,416 to 1,989,354 _RS09265 HGI48_RS09270: HGI48_RS09270 - PTS fructose transporter subunit IIBC, at 1,989,371 to 1,991,056 _RS09270 HGI48_RS09275: HGI48_RS09275 - deoxyribonuclease IV, at 1,991,125 to 1,992,000 _RS09275 HGI48_RS09280: HGI48_RS09280 - YeiH family putative sulfate export transporter, at 1,992,132 to 1,993,214 _RS09280 HGI48_RS09285: HGI48_RS09285 - LysR family transcriptional regulator, at 1,993,319 to 1,994,197 _RS09285
Group Condition HGI48_RS09265 HGI48_RS09270 HGI48_RS09275 HGI48_RS09280 HGI48_RS09285
plant Atlantic -1.5 -0.4 -0.1 +0.1 -0.4
plant Norland -1.5 -0.0 +0.1 -0.2 -0.5
plant Atlantic -1.1 +0.0 -0.4 -0.2 +0.0
plant Upstate -0.9 -0.2 -0.1 -0.4 -0.1
plant Norland -0.7 -0.1 -0.1 -0.1 -0.4
plant Upstate -0.9 -0.2 +0.0 -0.3 +0.0
carbon source M9+glycerol -0.1 +0.1 -0.3 -0.5 -0.5
plant Upstate -0.8 +0.0 -0.0 -0.3 -0.1
control PDB -0.3 -0.1 -0.2 -0.4 +0.1
carbon source M9+glycerol -0.1 -0.4 +0.0 -0.3 +0.0
control PDB -0.2 -0.2 +0.1 -0.2 -0.2
carbon source M9+polygalacturonate +1.2 -0.1 -0.7 -0.9 -0.2
control LB +0.0 -0.1 -0.2 -0.3 -0.1
plant Upstate -0.4 -0.2 +0.1 -0.0 -0.1
plant Upstate +0.0 -0.1 -0.1 -0.2 -0.2
control PDB +0.2 -0.2 -0.2 -0.1 -0.2
control PDB -0.8 -0.1 +0.2 -0.0 +0.2
plant Norland -0.1 -0.1 +0.1 -0.4 +0.1
plant Atlantic -0.8 -0.1 +0.2 +0.2 +0.0
carbon source M9+glycerol +0.1 +0.0 +0.1 -0.2 -0.4
carbon source M9+glycerol -0.4 -0.2 +0.2 -0.0 -0.1
control LB -0.2 -0.1 +0.2 -0.0 -0.3
carbon source M9+polygalacturonate +0.6 +0.1 -0.3 -0.6 -0.1
plant Atlantic -0.5 +0.1 +0.1 +0.0 -0.0
carbon source M9+sucrose +0.1 +0.3 -0.1 -0.5 +0.3
carbon source M9+sucrose +0.2 -0.0 -0.0 -0.5 +0.4
carbon source M9+sucrose +0.5 +0.1 +0.2 -0.5 -0.0
carbon source M9+glycerol +0.6 -0.2 -0.0 +0.3 -0.3
plant Atlantic -0.0 +0.1 -0.2 +0.1 +0.5
carbon source M9+polygalacturonate +1.3 +0.2 -0.2 -0.2 -0.3
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