Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 39 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
HGI48_RS08335 and HGI48_RS08340 overlap by 20 nucleotides
HGI48_RS08340 and HGI48_RS08345 overlap by 4 nucleotides
HGI48_RS08345 and HGI48_RS08350 are separated by 125 nucleotides
HGI48_RS08350 and HGI48_RS08355 are separated by 77 nucleotides
HGI48_RS08335: HGI48_RS08335 - DNA phosphorothioation-dependent restriction protein DptG, at 1,787,669 to 1,788,994
_RS08335
HGI48_RS08340: HGI48_RS08340 - DNA phosphorothioation-dependent restriction protein DptH, at 1,788,975 to 1,794,056
_RS08340
HGI48_RS08345: HGI48_RS08345 - restriction endonuclease, at 1,794,053 to 1,794,874
_RS08345
HGI48_RS08350: HGI48_RS08350 - class I SAM-dependent methyltransferase, at 1,795,000 to 1,795,431
_RS08350
HGI48_RS08355: HGI48_RS08355 - IS481 family transposase, at 1,795,509 to 1,796,550
_RS08355
Group
Condition
HGI48
_RS08335
HGI48
_RS08340
HGI48
_RS08345
HGI48
_RS08350
HGI48
_RS08355
control
PDB
-0.0
-0.1
-1.1
-0.4
-1.5
control
PDB
-0.3
-0.0
-0.7
-0.1
-1.3
control
PDB
+0.2
-0.0
-1.0
-0.6
-0.7
carbon source
M9+sucrose
+0.1
-0.1
-0.3
-0.2
-1.5
plant
Upstate
-0.4
+0.2
-0.3
+0.2
-1.7
carbon source
M9+polygalacturonate
-0.2
-0.0
-0.7
-0.4
-0.7
carbon source
M9+polygalacturonate
+0.0
-0.1
-0.6
-0.7
-0.5
control
PDB
-0.3
-0.1
-0.9
-0.2
-0.3
plant
Atlantic
-0.7
+0.2
+0.6
+0.0
-1.9
control
PDB
-0.4
-0.0
-0.1
-0.0
-1.2
carbon source
M9+polygalacturonate
+0.2
-0.1
-0.8
-0.3
-0.6
plant
Atlantic
-0.2
+0.0
+0.2
+0.4
-2.0
plant
Upstate
-0.5
+0.1
-0.1
+0.3
-1.3
carbon source
M9+glycerol
-0.6
+0.1
-0.4
+0.3
-0.8
plant
Atlantic
-0.9
+0.2
-0.1
+0.1
-0.5
plant
Norland
-0.3
-0.0
-0.2
+0.3
-0.8
plant
Norland
+0.2
-0.0
-0.5
+0.5
-0.9
control
PDB
-0.4
-0.1
-0.4
-0.2
+0.4
plant
Atlantic
+0.7
+0.2
-0.8
+0.3
-1.0
plant
Norland
-0.2
-0.0
-0.3
+0.3
-0.4
carbon source
M9+glycerol
-0.5
+0.0
+0.2
+0.4
-0.6
carbon source
M9+glycerol
-0.1
-0.1
+0.4
+0.4
-1.1
plant
Norland
+0.3
+0.2
+0.1
+0.2
-1.0
control
LB
-0.2
+0.1
-0.0
+0.6
-0.8
carbon source
M9+glycerol
-0.4
-0.2
+0.3
+0.9
-0.9
carbon source
M9+sucrose
+0.2
+0.1
+0.4
-0.2
-0.5
carbon source
M9+glycerol
-0.2
+0.1
-0.1
+0.6
-0.4
carbon source
M9+glycerol
-0.5
+0.2
+0.3
+0.5
+0.1
plant
Atlantic
+0.6
-0.0
-0.3
+0.3
+0.8
plant
Norland
-0.1
+0.2
+0.6
+0.4
+0.4
remove
HGI48_RS08335
plot
remove
HGI48_RS08340
plot
remove
HGI48_RS08345
remove
HGI48_RS08350
plot
remove
HGI48_RS08355
plot