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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS08145 and HGI48_RS08150 are separated by 142 nucleotides
HGI48_RS08150 and HGI48_RS08155 are separated by 380 nucleotides
HGI48_RS08155 and HGI48_RS08160 are separated by 10 nucleotides
HGI48_RS08160 and HGI48_RS08165 are separated by 266 nucleotides
HGI48_RS08145: HGI48_RS08145 - DUF2501 domain-containing protein, at 1,750,705 to 1,751,190
_RS08145
HGI48_RS08150: HGI48_RS08150 - flavin reductase family protein, at 1,751,333 to 1,751,923
_RS08150
HGI48_RS08155: HGI48_RS08155 - DUF1971 domain-containing protein, at 1,752,304 to 1,752,636
_RS08155
HGI48_RS08160: HGI48_RS08160 - DUF1869 domain-containing protein, at 1,752,647 to 1,752,985
_RS08160
HGI48_RS08165: HGI48_RS08165 - GNAT family N-acetyltransferase, at 1,753,252 to 1,753,767
_RS08165
Group
Condition
HGI48
_RS08145
HGI48
_RS08150
HGI48
_RS08155
HGI48
_RS08160
HGI48
_RS08165
carbon source
M9+polygalacturonate
-0.2
-1.0
+0.2
-3.1
+0.2
plant
Atlantic
-0.3
-1.0
-0.4
+0.1
-0.6
carbon source
M9+polygalacturonate
-0.0
-0.2
+0.2
-1.7
-0.3
plant
Norland
+0.3
+0.1
-0.3
-1.4
-0.3
carbon source
M9+glycerol
+0.0
-0.7
+0.4
-0.9
-0.2
control
PDB
+0.1
-0.1
-0.1
-0.2
-0.9
carbon source
M9+glycerol
+0.3
-0.6
-0.3
-0.1
-0.5
control
LB
+0.2
+0.1
-0.4
-0.8
-0.2
plant
Upstate
+0.1
+0.1
-0.0
-0.4
-0.8
plant
Norland
+0.3
+0.3
-0.2
-1.3
-0.1
carbon source
M9+polygalacturonate
-0.1
+0.4
-0.9
+0.2
-0.6
control
PDB
+0.1
-0.5
-0.5
-0.1
+0.1
carbon source
M9+sucrose
-0.3
-0.1
-0.5
-0.4
+0.3
control
LB
+0.1
+0.1
-0.2
-0.4
-0.5
carbon source
M9+glycerol
-0.4
+0.3
+0.0
-0.5
-0.1
plant
Norland
+0.2
+0.0
-0.5
-0.6
+0.1
plant
Norland
+0.1
-0.1
+0.3
-0.5
-0.6
control
PDB
-0.1
-0.4
+0.4
+0.0
-0.5
control
PDB
-0.0
-0.2
-0.3
+0.5
-0.3
carbon source
M9+glycerol
+0.0
-0.5
-0.5
+0.1
+0.4
carbon source
M9+glycerol
+0.3
+0.3
-0.4
-0.6
-0.0
plant
Norland
+0.2
+0.4
+0.2
-0.9
-0.2
plant
Atlantic
+0.4
-0.1
-0.5
+0.2
-0.3
plant
Atlantic
+0.1
-0.6
+0.2
-0.4
+0.5
plant
Upstate
+0.1
+0.3
-0.2
-0.4
+0.2
carbon source
M9+sucrose
+0.5
-0.7
-0.1
+0.4
+0.2
plant
Atlantic
+0.2
+0.7
-0.0
+0.1
-0.6
plant
Upstate
+0.3
+0.1
-0.1
+0.6
-0.3
carbon source
M9+glycerol
+0.3
+0.4
-0.1
-0.1
+0.2
plant
Upstate
-0.1
-0.0
+0.2
+0.7
+0.2
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