Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS08120 and HGI48_RS08125 are separated by 166 nucleotidesHGI48_RS08125 and HGI48_RS08130 are separated by 16 nucleotidesHGI48_RS08130 and HGI48_RS08135 are separated by 10 nucleotidesHGI48_RS08135 and HGI48_RS08140 are separated by 92 nucleotides HGI48_RS08120: HGI48_RS08120 - ABC transporter ATP-binding protein, at 1,745,380 to 1,746,141 _RS08120 HGI48_RS08125: HGI48_RS08125 - MarR family transcriptional regulator, at 1,746,308 to 1,746,775 _RS08125 HGI48_RS08130: HGI48_RS08130 - efflux RND transporter periplasmic adaptor subunit, at 1,746,792 to 1,747,970 _RS08130 HGI48_RS08135: HGI48_RS08135 - DHA2 family efflux MFS transporter permease subunit, at 1,747,981 to 1,749,507 _RS08135 HGI48_RS08140: HGI48_RS08140 - helix-turn-helix domain-containing protein, at 1,749,600 to 1,750,499 _RS08140
Group Condition HGI48_RS08120 HGI48_RS08125 HGI48_RS08130 HGI48_RS08135 HGI48_RS08140
plant Atlantic -0.6 -0.8 +0.2 -0.3 +0.6
plant Upstate -0.0 -0.7 -0.2 -0.1 +0.1
plant Atlantic -0.1 -0.5 -0.1 +0.1 -0.0
plant Atlantic -0.3 -0.3 -0.0 +0.1 +0.3
carbon source M9+polygalacturonate -0.4 +0.3 +0.0 +0.0 -0.1
plant Upstate -0.2 -0.2 -0.0 +0.3 +0.0
carbon source M9+glycerol -0.4 -0.0 +0.1 +0.3 -0.0
carbon source M9+polygalacturonate -0.3 +0.3 +0.2 +0.1 -0.2
plant Upstate -0.2 +0.3 -0.4 +0.2 +0.2
plant Norland -0.2 -0.4 +0.3 +0.1 +0.3
plant Norland -0.4 +0.6 +0.0 -0.1 +0.1
carbon source M9+glycerol -0.1 -0.3 +0.0 +0.4 +0.1
plant Norland -0.3 +0.4 -0.2 +0.0 +0.2
control LB -0.2 +0.2 -0.2 +0.4 -0.0
carbon source M9+glycerol -0.3 +0.3 +0.0 +0.2 +0.1
carbon source M9+sucrose +0.0 +0.2 +0.0 -0.3 +0.3
plant Norland -0.1 +0.4 -0.1 +0.1 +0.1
plant Upstate -0.0 -0.1 -0.1 +0.3 +0.2
carbon source M9+glycerol -0.2 +0.5 -0.1 +0.3 +0.1
carbon source M9+glycerol +0.1 +0.3 -0.1 +0.2 +0.1
control LB -0.1 +0.5 +0.0 +0.2 +0.2
plant Atlantic -0.0 +0.3 -0.1 +0.5 +0.5
plant Norland -0.0 +1.0 -0.0 +0.1 +0.1
plant Atlantic +0.4 +0.3 +0.3 +0.3 +0.1
control PDB -0.0 +0.4 +1.4 +1.3 +0.4
control PDB -0.5 +1.4 +1.4 +1.1 +0.5
control PDB -0.3 +0.5 +1.5 +1.6 +0.6
control PDB -0.1 +0.9 +1.3 +1.7 +0.6
control PDB -0.4 +0.8 +1.8 +1.8 +0.7
control PDB -0.0 +1.1 +1.5 +1.7 +0.6
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