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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS07810 and HGI48_RS07815 are separated by 750 nucleotides
HGI48_RS07815 and HGI48_RS07820 are separated by 5 nucleotides
HGI48_RS07820 and HGI48_RS07825 are separated by 198 nucleotides
HGI48_RS07825 and HGI48_RS07830 are separated by 0 nucleotides
HGI48_RS07810: HGI48_RS07810 - MFS transporter, at 1,671,918 to 1,673,138
_RS07810
HGI48_RS07815: HGI48_RS07815 - chemotaxis protein CheW, at 1,673,889 to 1,674,866
_RS07815
HGI48_RS07820: HGI48_RS07820 - hypothetical protein, at 1,674,872 to 1,675,123
_RS07820
HGI48_RS07825: HGI48_RS07825 - malonate decarboxylase subunit alpha, at 1,675,322 to 1,676,977
_RS07825
HGI48_RS07830: HGI48_RS07830 - triphosphoribosyl-dephospho-CoA synthase, at 1,676,978 to 1,677,835
_RS07830
Group
Condition
HGI48
_RS07810
HGI48
_RS07815
HGI48
_RS07820
HGI48
_RS07825
HGI48
_RS07830
plant
Norland
+0.3
+0.1
-0.4
+0.0
-1.7
carbon source
M9+glycerol
-0.0
-0.0
+0.2
+0.0
-1.6
carbon source
M9+polygalacturonate
+0.1
+0.0
+0.1
-0.2
-0.9
plant
Norland
+0.0
-0.0
+0.1
+0.0
-0.9
carbon source
M9+glycerol
-0.3
-0.2
+0.1
-0.0
-0.3
plant
Atlantic
+0.3
-0.2
-0.0
-0.1
-0.6
carbon source
M9+sucrose
+0.1
-0.1
-0.4
-0.1
-0.0
carbon source
M9+glycerol
+0.1
-0.0
-0.5
-0.0
-0.0
control
LB
-0.0
+0.2
-0.3
+0.1
-0.4
control
PDB
-0.0
+0.0
+0.2
-0.1
-0.5
carbon source
M9+glycerol
+0.2
-0.1
+0.3
+0.1
-0.8
carbon source
M9+polygalacturonate
-0.3
+0.1
+0.3
+0.0
-0.2
plant
Upstate
+0.5
-0.1
+0.1
-0.3
-0.0
control
LB
+0.2
-0.0
+0.4
+0.1
-0.2
control
LB
-0.1
-0.1
+0.4
-0.0
+0.1
plant
Norland
+0.1
-0.2
+0.4
-0.0
+0.1
control
PDB
+0.0
+0.0
+0.6
-0.0
-0.0
control
PDB
+0.2
-0.0
+0.0
-0.2
+0.6
plant
Norland
-0.1
-0.2
+0.3
-0.0
+0.6
plant
Atlantic
+0.1
+0.0
+0.3
-0.2
+0.5
plant
Upstate
+0.0
-0.0
+0.2
-0.1
+0.6
control
PDB
-0.0
-0.1
+0.3
-0.2
+0.6
control
PDB
-0.2
+0.1
+0.4
-0.2
+0.8
carbon source
M9+sucrose
-0.0
-0.0
+0.5
-0.2
+0.6
carbon source
M9+sucrose
+0.2
-0.0
+0.3
+0.0
+0.6
plant
Atlantic
+0.1
-0.2
+0.7
+0.2
+0.3
plant
Atlantic
+0.3
-0.2
+0.5
+0.2
+0.5
carbon source
M9+polygalacturonate
-0.2
+0.2
+0.3
+0.0
+1.2
plant
Upstate
+0.0
-0.1
+0.7
-0.0
+1.3
plant
Atlantic
+0.5
-0.0
+0.4
+0.0
+1.4
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