Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS07695 and HGI48_RS07700 are separated by 10 nucleotidesHGI48_RS07700 and HGI48_RS07705 are separated by 64 nucleotidesHGI48_RS07705 and HGI48_RS07710 overlap by 14 nucleotidesHGI48_RS07710 and HGI48_RS07715 are separated by 162 nucleotides HGI48_RS07695: HGI48_RS07695 - TonB-dependent receptor, at 1,642,911 to 1,645,232 _RS07695 HGI48_RS07700: HGI48_RS07700 - Tat pathway signal sequence domain protein, at 1,645,243 to 1,648,023 _RS07700 HGI48_RS07705: HGI48_RS07705 - hypothetical protein, at 1,648,088 to 1,648,786 _RS07705 HGI48_RS07710: HGI48_RS07710 - LysR family transcriptional regulator, at 1,648,773 to 1,649,714 _RS07710 HGI48_RS07715: HGI48_RS07715 - DUF2076 domain-containing protein, at 1,649,877 to 1,650,653 _RS07715
Group Condition HGI48_RS07695 HGI48_RS07700 HGI48_RS07705 HGI48_RS07710 HGI48_RS07715
control PDB -0.1 +0.0 -0.0 -0.1 -0.9
plant Atlantic -0.1 -0.2 +0.2 -0.8 -0.0
control PDB -0.1 -0.1 +0.2 -0.5 -0.5
plant Norland +0.0 -0.1 -0.0 -0.6 -0.1
control PDB -0.1 -0.0 +0.1 -0.3 -0.5
plant Upstate -0.3 -0.0 +0.2 -0.1 -0.4
carbon source M9+glycerol -0.0 -0.0 -0.2 -0.5 +0.1
plant Atlantic +0.2 +0.0 -0.2 +0.0 -0.6
carbon source M9+polygalacturonate -0.1 -0.0 +0.1 -0.3 -0.2
control PDB -0.0 -0.0 +0.1 +0.1 -0.7
plant Upstate -0.2 -0.1 +0.2 -0.3 -0.2
carbon source M9+polygalacturonate +0.1 +0.2 +0.2 -0.6 -0.2
control PDB +0.0 -0.1 +0.1 +0.2 -0.6
plant Upstate +0.2 -0.1 -0.0 -0.3 -0.1
control PDB +0.1 +0.2 +0.2 -0.2 -0.4
control LB -0.1 -0.1 +0.3 -0.2 -0.0
plant Norland -0.1 +0.0 +0.2 -0.3 +0.0
plant Atlantic +0.0 -0.1 +0.5 -0.4 +0.0
carbon source M9+glycerol +0.1 -0.2 +0.2 +0.1 -0.2
plant Norland +0.1 -0.1 +0.2 -0.1 -0.2
plant Atlantic +0.3 -0.2 +0.1 +0.1 -0.2
plant Norland -0.2 +0.1 +0.1 +0.2 -0.1
carbon source M9+glycerol -0.1 -0.0 +0.2 -0.3 +0.3
carbon source M9+sucrose -0.1 +0.1 -0.1 +0.4 -0.1
control LB -0.0 +0.1 +0.1 +0.3 -0.2
carbon source M9+glycerol -0.2 -0.1 +0.1 +0.5 +0.1
carbon source M9+polygalacturonate +0.4 +0.0 +0.1 +0.2 -0.2
plant Norland -0.0 -0.0 +0.2 +0.5 -0.1
carbon source M9+sucrose +0.3 -0.0 -0.2 +0.7 -0.3
plant Norland +0.2 -0.1 -0.0 +0.5 -0.1
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