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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS07410 and HGI48_RS07415 are separated by 901 nucleotides
HGI48_RS07415 and HGI48_RS07420 are separated by 297 nucleotides
HGI48_RS07420 and HGI48_RS07425 are separated by 117 nucleotides
HGI48_RS07425 and HGI48_RS07430 are separated by 888 nucleotides
HGI48_RS07410: HGI48_RS07410 - anaerobic C4-dicarboxylate transporter, at 1,577,848 to 1,579,188
_RS07410
HGI48_RS07415: HGI48_RS07415 - aminobutyraldehyde dehydrogenase, at 1,580,090 to 1,581,526
_RS07415
HGI48_RS07420: HGI48_RS07420 - putrescine aminotransferase, at 1,581,824 to 1,583,242
_RS07420
HGI48_RS07425: HGI48_RS07425 - hypothetical protein, at 1,583,360 to 1,583,662
_RS07425
HGI48_RS07430: HGI48_RS07430 - DUF3916 domain-containing protein, at 1,584,551 to 1,585,093
_RS07430
Group
Condition
HGI48
_RS07410
HGI48
_RS07415
HGI48
_RS07420
HGI48
_RS07425
HGI48
_RS07430
carbon source
M9+sucrose
-0.0
-0.1
+0.1
-0.3
-1.0
control
PDB
-0.0
+0.0
-0.0
-0.2
-0.5
plant
Atlantic
+0.2
-0.0
-0.4
-0.3
-0.2
control
PDB
-0.1
-0.0
+0.1
-0.2
-0.4
plant
Atlantic
+0.3
-0.4
+0.3
-0.1
-0.7
carbon source
M9+glycerol
+0.0
-0.3
+0.0
-0.2
-0.1
plant
Norland
+0.1
-0.1
-0.0
-0.0
-0.4
control
PDB
+0.2
-0.1
+0.1
-0.4
-0.3
plant
Upstate
-0.1
-0.2
-0.1
-0.2
+0.1
plant
Norland
+0.2
-0.1
+0.1
+0.1
-0.7
plant
Atlantic
+0.1
-0.4
+0.1
-0.1
-0.1
plant
Norland
-0.0
-0.1
+0.1
+0.1
-0.3
control
LB
-0.1
-0.1
+0.2
-0.0
-0.2
control
PDB
-0.3
+0.1
-0.0
-0.3
+0.4
plant
Upstate
-0.1
-0.1
-0.2
+0.3
-0.1
carbon source
M9+glycerol
+0.2
-0.1
-0.3
+0.0
+0.0
carbon source
M9+polygalacturonate
+0.3
-0.2
-0.2
-0.2
+0.3
plant
Upstate
+0.1
-0.2
-0.1
+0.2
+0.0
control
LB
+0.1
-0.1
+0.1
-0.1
+0.1
carbon source
M9+glycerol
-0.1
-0.1
+0.2
-0.2
+0.4
carbon source
M9+sucrose
+0.3
+0.0
+0.3
-0.0
-0.5
control
PDB
+0.4
+0.2
+0.4
-0.2
-0.5
carbon source
M9+polygalacturonate
+0.2
-0.0
+0.0
+0.1
+0.2
carbon source
M9+polygalacturonate
+0.3
-0.2
+0.2
+0.2
+0.1
plant
Norland
+0.3
+0.2
+0.4
+0.3
-0.6
carbon source
M9+sucrose
+0.6
+0.0
+0.3
+0.1
-0.4
plant
Atlantic
+0.4
+0.3
+0.1
+0.2
-0.3
plant
Upstate
+0.2
-0.1
+0.1
+0.3
+0.2
carbon source
M9+glycerol
+0.2
+0.1
+0.1
+0.0
+0.4
carbon source
M9+glycerol
+0.2
+0.1
-0.0
+0.3
+0.3
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