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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS07140 and HGI48_RS07145 are separated by 664 nucleotides
HGI48_RS07145 and HGI48_RS07150 are separated by 119 nucleotides
HGI48_RS07150 and HGI48_RS07155 are separated by 191 nucleotides
HGI48_RS07155 and HGI48_RS07160 overlap by 11 nucleotides
HGI48_RS07140: HGI48_RS07140 - hypothetical protein, at 1,514,794 to 1,515,027
_RS07140
HGI48_RS07145: HGI48_RS07145 - hypothetical protein, at 1,515,692 to 1,516,675
_RS07145
HGI48_RS07150: HGI48_RS07150 - AAA family ATPase, at 1,516,795 to 1,518,621
_RS07150
HGI48_RS07155: HGI48_RS07155 - TraR/DksA family transcriptional regulator, at 1,518,813 to 1,519,022
_RS07155
HGI48_RS07160: HGI48_RS07160 - DUF2857 domain-containing protein, at 1,519,012 to 1,519,596
_RS07160
Group
Condition
HGI48
_RS07140
HGI48
_RS07145
HGI48
_RS07150
HGI48
_RS07155
HGI48
_RS07160
plant
Atlantic
N.D.
-2.3
+0.1
-0.6
N.D.
control
PDB
N.D.
-0.9
-0.7
+0.1
N.D.
control
PDB
N.D.
-0.9
-0.5
+0.1
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.2
-0.6
-0.7
N.D.
plant
Norland
N.D.
-0.4
-0.1
-0.5
N.D.
control
PDB
N.D.
-0.9
-0.3
+0.1
N.D.
plant
Upstate
N.D.
-0.3
+0.0
-0.4
N.D.
plant
Norland
N.D.
-0.6
+0.0
-0.1
N.D.
control
PDB
N.D.
-0.7
+0.1
+0.0
N.D.
control
PDB
N.D.
-0.4
+0.2
-0.2
N.D.
plant
Upstate
N.D.
+0.2
-0.0
-0.4
N.D.
plant
Atlantic
N.D.
-0.5
+0.1
+0.2
N.D.
plant
Norland
N.D.
-0.6
+0.1
+0.3
N.D.
control
PDB
N.D.
-0.4
+0.1
+0.3
N.D.
plant
Norland
N.D.
-0.4
+0.1
+0.4
N.D.
plant
Atlantic
N.D.
-0.8
+1.0
+0.1
N.D.
control
LB
N.D.
-0.5
+0.2
+0.6
N.D.
carbon source
M9+glycerol
N.D.
-0.2
-0.2
+0.8
N.D.
plant
Atlantic
N.D.
-0.4
+0.4
+0.5
N.D.
carbon source
M9+sucrose
N.D.
+0.9
-0.3
-0.1
N.D.
plant
Upstate
N.D.
+0.2
-0.0
+0.4
N.D.
plant
Atlantic
N.D.
+0.2
+0.6
-0.2
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.9
-0.6
+0.4
N.D.
carbon source
M9+glycerol
N.D.
+0.0
+0.3
+0.4
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.6
+0.0
+0.1
N.D.
plant
Atlantic
N.D.
+0.3
+0.6
-0.0
N.D.
plant
Norland
N.D.
+0.4
+0.1
+0.4
N.D.
carbon source
M9+sucrose
N.D.
+1.4
-0.1
-0.4
N.D.
plant
Norland
N.D.
+0.3
+0.4
+0.3
N.D.
carbon source
M9+sucrose
N.D.
+1.3
-0.0
-0.2
N.D.
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