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Gene
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Nearby
Cofit
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS07045 and HGI48_RS07050 are separated by 106 nucleotides
HGI48_RS07050 and HGI48_RS07055 are separated by 98 nucleotides
HGI48_RS07055 and HGI48_RS07060 are separated by 138 nucleotides
HGI48_RS07060 and HGI48_RS07065 overlap by 4 nucleotides
HGI48_RS07045: HGI48_RS07045 - transposase, at 1,493,911 to 1,494,186
_RS07045
HGI48_RS07050: HGI48_RS07050 - IS110 family transposase, at 1,494,293 to 1,495,537
_RS07050
HGI48_RS07055: HGI48_RS07055 - IS481 family transposase, at 1,495,636 to 1,496,677
_RS07055
HGI48_RS07060: HGI48_RS07060 - ATP-binding protein, at 1,496,816 to 1,498,639
_RS07060
HGI48_RS07065: HGI48_RS07065 - SIR2 family protein, at 1,498,636 to 1,499,826
_RS07065
Group
Condition
HGI48
_RS07045
HGI48
_RS07050
HGI48
_RS07055
HGI48
_RS07060
HGI48
_RS07065
carbon source
M9+glycerol
+0.3
-0.1
-1.7
+0.0
-0.7
carbon source
M9+polygalacturonate
+0.3
-0.1
-2.0
+0.1
+0.1
control
PDB
-0.3
+0.0
-0.3
-0.3
-0.8
plant
Norland
-0.3
+0.1
-1.5
-0.2
+0.3
control
PDB
-0.6
-0.1
-0.4
-0.1
-0.3
control
PDB
-0.1
-0.2
-0.4
-0.2
-0.6
carbon source
M9+glycerol
-0.3
+0.0
-0.8
-0.0
-0.2
plant
Atlantic
-0.6
+0.2
-1.0
+0.1
-0.0
carbon source
M9+glycerol
+0.1
+0.1
-1.1
+0.1
-0.4
plant
Upstate
+0.0
+0.1
-1.5
+0.2
-0.1
carbon source
M9+sucrose
+0.1
-0.1
-1.2
+0.1
-0.1
control
PDB
-0.6
-0.1
+0.1
-0.3
-0.4
control
LB
+0.0
+0.2
-1.1
-0.0
-0.2
carbon source
M9+sucrose
-0.1
+0.0
-0.7
+0.2
-0.3
carbon source
M9+polygalacturonate
-0.2
+0.1
-0.4
+0.3
-0.5
control
PDB
+0.1
-0.1
-0.5
+0.1
-0.4
plant
Upstate
+0.5
+0.1
-1.3
-0.1
+0.0
plant
Atlantic
+0.0
-0.0
-0.8
+0.1
-0.0
control
LB
-0.0
+0.1
-0.6
+0.2
-0.2
plant
Norland
-0.4
+0.2
+0.2
-0.1
-0.4
carbon source
M9+polygalacturonate
+0.1
+0.0
-0.3
+0.3
-0.6
plant
Atlantic
-0.2
+0.4
-0.3
-0.5
+0.2
plant
Upstate
-0.2
+0.2
-0.8
+0.4
+0.0
plant
Upstate
+0.5
+0.2
-0.7
+0.1
-0.3
plant
Norland
+0.6
-0.1
-1.0
+0.0
+0.3
plant
Atlantic
+0.3
+0.1
-0.4
+0.1
-0.2
plant
Norland
+0.5
-0.1
-0.2
+0.1
-0.2
plant
Upstate
+0.7
+0.2
-0.4
+0.2
+0.1
carbon source
M9+glycerol
+0.3
+0.1
+0.6
-0.1
-0.0
plant
Atlantic
+0.4
+0.4
+0.3
+0.0
+0.3
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