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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS06910 and HGI48_RS06915 overlap by 14 nucleotides
HGI48_RS06915 and HGI48_RS06920 are separated by 39 nucleotides
HGI48_RS06920 and HGI48_RS06925 are separated by 518 nucleotides
HGI48_RS06925 and HGI48_RS06930 overlap by 4 nucleotides
HGI48_RS06910: HGI48_RS06910 - ATP-binding cassette domain-containing protein, at 1,465,347 to 1,466,438
_RS06910
HGI48_RS06915: HGI48_RS06915 - ABC transporter substrate-binding protein, at 1,466,425 to 1,467,939
_RS06915
HGI48_RS06920: HGI48_RS06920 - AMP nucleosidase, at 1,467,979 to 1,469,436
_RS06920
HGI48_RS06925: HGI48_RS06925 - D-galactonate utilization transcriptional regulator DgoR, at 1,469,955 to 1,470,653
_RS06925
HGI48_RS06930: HGI48_RS06930 - 2-dehydro-3-deoxygalactonokinase, at 1,470,650 to 1,471,546
_RS06930
Group
Condition
HGI48
_RS06910
HGI48
_RS06915
HGI48
_RS06920
HGI48
_RS06925
HGI48
_RS06930
carbon source
M9+glycerol
-0.1
-0.0
-0.2
-0.3
-0.8
control
PDB
+0.1
+0.0
-0.1
-0.9
-0.4
control
PDB
-0.4
-0.1
-0.2
-0.4
-0.1
plant
Atlantic
-0.3
-0.0
-0.3
-0.4
-0.0
carbon source
M9+glycerol
-0.0
-0.3
-0.3
-0.1
-0.2
control
PDB
-0.1
-0.2
-0.2
-0.5
+0.1
control
PDB
-0.2
-0.0
-0.0
-0.7
+0.2
control
PDB
-0.2
+0.0
-0.0
-0.5
-0.0
plant
Upstate
+0.1
-0.1
-0.2
+0.0
-0.4
carbon source
M9+sucrose
+0.1
-0.0
+0.0
-0.2
-0.6
control
PDB
-0.1
+0.1
-0.0
-0.5
+0.0
carbon source
M9+glycerol
-0.1
+0.0
+0.1
-0.1
-0.3
plant
Upstate
+0.0
-0.1
-0.2
-0.3
+0.2
plant
Upstate
-0.1
-0.1
-0.3
+0.3
-0.2
plant
Atlantic
+0.1
+0.1
+0.0
-0.5
-0.0
carbon source
M9+glycerol
-0.1
-0.1
-0.1
-0.2
+0.1
plant
Atlantic
+0.0
-0.1
-0.2
+0.6
-0.6
plant
Norland
-0.0
-0.1
-0.2
+0.2
-0.2
carbon source
M9+sucrose
+0.2
-0.0
+0.2
-0.3
-0.2
control
LB
+0.1
+0.0
-0.2
-0.2
+0.0
carbon source
M9+glycerol
-0.0
+0.1
-0.1
+0.2
-0.3
plant
Atlantic
-0.2
+0.2
+0.0
+0.3
-0.1
plant
Norland
+0.2
+0.1
-0.1
+0.2
-0.0
plant
Upstate
+0.1
-0.1
+0.1
-0.1
+0.3
plant
Norland
+0.2
+0.1
-0.2
+0.1
+0.2
plant
Upstate
+0.4
+0.1
-0.2
+0.1
+0.0
plant
Atlantic
-0.1
+0.0
+0.6
-0.6
+0.7
carbon source
M9+polygalacturonate
+0.2
+0.2
+0.2
-0.1
+0.2
carbon source
M9+polygalacturonate
+0.3
-0.0
-0.0
+0.4
+0.0
carbon source
M9+polygalacturonate
+0.3
+0.2
+0.1
-0.1
+0.4
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