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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS06580 and HGI48_RS06590 are separated by 444 nucleotides
HGI48_RS06590 and HGI48_RS06595 are separated by 203 nucleotides
HGI48_RS06595 and HGI48_RS06600 are separated by 22 nucleotides
HGI48_RS06600 and HGI48_RS06605 are separated by 393 nucleotides
HGI48_RS06580: HGI48_RS06580 - tRNA-Lys, at 1,394,053 to 1,394,128
_RS06580
HGI48_RS06590: HGI48_RS06590 - DUF554 domain-containing protein, at 1,394,573 to 1,395,289
_RS06590
HGI48_RS06595: HGI48_RS06595 - quinolinate synthase NadA, at 1,395,493 to 1,396,539
_RS06595
HGI48_RS06600: HGI48_RS06600 - nicotinamide riboside transporter PnuC, at 1,396,562 to 1,397,287
_RS06600
HGI48_RS06605: HGI48_RS06605 - 3-deoxy-7-phosphoheptulonate synthase AroG, at 1,397,681 to 1,398,733
_RS06605
Group
Condition
HGI48
_RS06580
HGI48
_RS06590
HGI48
_RS06595
HGI48
_RS06600
HGI48
_RS06605
carbon source
M9+sucrose
N.D.
-0.2
-2.3
+0.4
+0.0
plant
Atlantic
N.D.
-0.5
-0.2
-0.9
-0.3
carbon source
M9+sucrose
N.D.
-0.0
-1.8
+0.3
-0.4
carbon source
M9+glycerol
N.D.
-0.1
-1.1
-0.1
-0.2
carbon source
M9+glycerol
N.D.
-0.5
-0.5
-0.5
-0.0
carbon source
M9+polygalacturonate
N.D.
+0.0
-1.4
+0.2
-0.3
carbon source
M9+polygalacturonate
N.D.
+0.0
-1.5
+0.2
-0.1
carbon source
M9+polygalacturonate
N.D.
-0.1
-1.6
+0.3
+0.1
carbon source
M9+sucrose
N.D.
-0.1
-1.6
+0.2
+0.1
carbon source
M9+glycerol
N.D.
+0.1
-0.6
-0.4
-0.1
plant
Atlantic
N.D.
-0.6
-0.1
-0.0
-0.2
plant
Atlantic
N.D.
-0.3
-0.1
-0.2
-0.3
control
PDB
N.D.
-0.3
-0.1
-0.1
-0.4
carbon source
M9+glycerol
N.D.
+0.0
-0.4
+0.0
-0.3
plant
Upstate
N.D.
-0.1
-0.2
-0.2
-0.1
plant
Atlantic
N.D.
-0.0
+0.1
-0.5
-0.1
control
PDB
N.D.
-0.0
-0.2
-0.2
+0.0
plant
Upstate
N.D.
-0.1
+0.1
+0.0
-0.3
plant
Norland
N.D.
-0.1
+0.0
+0.1
-0.2
carbon source
M9+glycerol
N.D.
-0.1
-0.2
-0.1
+0.2
plant
Upstate
N.D.
+0.2
-0.2
-0.0
-0.1
plant
Upstate
N.D.
-0.3
+0.3
+0.1
-0.3
control
PDB
N.D.
-0.2
-0.2
+0.1
+0.2
plant
Norland
N.D.
+0.1
-0.3
+0.0
+0.0
plant
Norland
N.D.
-0.2
+0.4
-0.0
-0.2
plant
Atlantic
N.D.
+0.2
+0.3
-0.2
-0.4
plant
Norland
N.D.
-0.1
+0.3
+0.0
-0.2
carbon source
M9+glycerol
N.D.
+0.2
-0.4
+0.2
+0.0
plant
Norland
N.D.
+0.0
+0.3
-0.1
+0.1
plant
Atlantic
N.D.
-0.1
+0.4
+0.1
+0.1
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HGI48_RS06595
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