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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS06485 and HGI48_RS06490 overlap by 1 nucleotides
HGI48_RS06490 and HGI48_RS06495 are separated by 34 nucleotides
HGI48_RS06495 and HGI48_RS06500 are separated by 239 nucleotides
HGI48_RS06500 and HGI48_RS06505 are separated by 17 nucleotides
HGI48_RS06485: HGI48_RS06485 - succinate dehydrogenase membrane anchor subunit, at 1,374,864 to 1,375,211
_RS06485
HGI48_RS06490: HGI48_RS06490 - succinate dehydrogenase flavoprotein subunit, at 1,375,211 to 1,376,977
_RS06490
HGI48_RS06495: HGI48_RS06495 - succinate dehydrogenase iron-sulfur subunit, at 1,377,012 to 1,377,728
_RS06495
HGI48_RS06500: HGI48_RS06500 - 2-oxoglutarate dehydrogenase E1 component, at 1,377,968 to 1,380,775
_RS06500
HGI48_RS06505: HGI48_RS06505 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 1,380,793 to 1,382,019
_RS06505
Group
Condition
HGI48
_RS06485
HGI48
_RS06490
HGI48
_RS06495
HGI48
_RS06500
HGI48
_RS06505
carbon source
M9+polygalacturonate
-1.9
-1.3
-1.9
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.5
-1.4
-1.6
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.6
-1.1
-1.5
N.D.
N.D.
control
PDB
-1.1
-0.9
-1.3
N.D.
N.D.
control
PDB
-1.2
-0.9
-1.2
N.D.
N.D.
plant
Atlantic
-0.7
-0.8
-1.4
N.D.
N.D.
control
PDB
-1.1
-0.6
-1.1
N.D.
N.D.
control
PDB
-1.1
-0.8
-0.8
N.D.
N.D.
control
PDB
-0.5
-0.8
-1.1
N.D.
N.D.
control
PDB
-0.7
-0.7
-0.9
N.D.
N.D.
control
LB
-0.5
-0.7
-1.0
N.D.
N.D.
control
LB
-1.0
-0.4
-0.7
N.D.
N.D.
plant
Atlantic
-0.7
-0.3
-0.9
N.D.
N.D.
control
LB
-0.7
-0.5
-0.6
N.D.
N.D.
control
LB
-0.4
-0.5
-0.5
N.D.
N.D.
plant
Atlantic
-0.5
-0.6
-0.4
N.D.
N.D.
plant
Atlantic
-0.8
-0.6
-0.0
N.D.
N.D.
plant
Norland
-0.7
-0.4
-0.2
N.D.
N.D.
plant
Norland
-0.4
-0.4
-0.4
N.D.
N.D.
plant
Atlantic
-0.6
-0.1
-0.5
N.D.
N.D.
plant
Upstate
-0.4
-0.3
-0.3
N.D.
N.D.
plant
Upstate
-0.6
-0.0
-0.5
N.D.
N.D.
carbon source
M9+glycerol
-0.2
-0.1
-0.7
N.D.
N.D.
plant
Upstate
+0.1
-0.6
-0.3
N.D.
N.D.
carbon source
M9+glycerol
+0.3
+0.2
-0.6
N.D.
N.D.
carbon source
M9+glycerol
+0.6
+0.2
+0.7
N.D.
N.D.
carbon source
M9+glycerol
+0.9
+0.6
+0.3
N.D.
N.D.
carbon source
M9+sucrose
+0.5
+1.2
+0.6
N.D.
N.D.
carbon source
M9+sucrose
+0.7
+1.1
+0.6
N.D.
N.D.
carbon source
M9+sucrose
+0.6
+1.0
+1.2
N.D.
N.D.
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