Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS06460 and HGI48_RS06465 overlap by 7 nucleotidesHGI48_RS06465 and HGI48_RS06470 overlap by 11 nucleotidesHGI48_RS06470 and HGI48_RS06475 are separated by 221 nucleotidesHGI48_RS06475 and HGI48_RS06480 are separated by 655 nucleotides HGI48_RS06460: HGI48_RS06460 - 5-oxoprolinase subunit PxpB, at 1,370,008 to 1,370,667 _RS06460 HGI48_RS06465: HGI48_RS06465 - biotin-dependent carboxyltransferase family protein, at 1,370,661 to 1,371,590 _RS06465 HGI48_RS06470: HGI48_RS06470 - 5-oxoprolinase subunit PxpA, at 1,371,580 to 1,372,317 _RS06470 HGI48_RS06475: HGI48_RS06475 - citrate synthase, at 1,372,539 to 1,373,825 _RS06475 HGI48_RS06480: HGI48_RS06480 - succinate dehydrogenase cytochrome b556 subunit, at 1,374,481 to 1,374,870 _RS06480
Group Condition HGI48_RS06460 HGI48_RS06465 HGI48_RS06470 HGI48_RS06475 HGI48_RS06480
carbon source M9+glycerol -0.4 +0.2 +0.1 -2.7 -0.6
plant Norland -0.2 -0.3 +0.2 -2.2 -0.8
carbon source M9+polygalacturonate -0.3 +0.7 -0.2 -1.2 -2.3
carbon source M9+polygalacturonate -0.1 +0.1 -0.1 -1.4 -1.7
carbon source M9+glycerol -0.2 +0.0 +0.2 -3.4 +0.5
carbon source M9+polygalacturonate +0.1 -0.5 -0.2 -1.1 -1.2
plant Upstate -0.1 +0.2 -0.0 -2.2 -0.6
control LB -0.1 -0.0 -0.3 -1.4 -0.8
control LB -0.3 -0.0 -0.1 -1.0 -1.0
carbon source M9+glycerol -0.2 -0.2 -0.0 -1.9 +0.1
control LB -0.2 +0.1 -0.1 -1.0 -1.1
plant Norland +0.2 -0.1 +0.4 -1.7 -1.0
plant Norland -0.6 -0.1 +0.2 -1.1 -0.6
plant Upstate -0.4 +0.1 +0.3 -1.6 -0.4
carbon source M9+sucrose -0.0 +0.3 -0.9 -2.3 +1.0
plant Upstate -0.2 +0.4 +0.0 -1.2 -0.6
plant Atlantic -0.3 -0.1 +0.4 -0.8 -0.7
plant Norland -0.1 +0.2 +0.3 -1.0 -1.0
carbon source M9+glycerol +0.2 -0.1 +0.3 -2.4 +0.6
carbon source M9+glycerol +0.1 -0.2 -0.1 -1.5 +0.4
plant Atlantic -0.2 +0.3 +0.1 -0.5 -1.1
plant Norland -0.1 +0.2 +0.4 -1.3 -0.3
carbon source M9+sucrose -0.2 +0.1 -0.5 -1.6 +1.5
control PDB -0.3 +0.4 +0.7 +0.5 -1.6
carbon source M9+sucrose -0.7 +0.2 -0.7 -0.7 +1.5
control PDB +0.1 +0.5 +0.8 +0.3 -1.7
control PDB -0.2 +0.0 +0.3 +0.8 -0.8
control PDB -0.1 +0.3 +0.6 +0.6 -1.1
control PDB +0.0 +0.3 +1.1 +0.3 -0.8
control PDB +0.2 +0.2 +0.8 +0.3 -0.5
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