Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS06445 and HGI48_RS06450 are separated by 28 nucleotidesHGI48_RS06450 and HGI48_RS06455 are separated by 48 nucleotidesHGI48_RS06455 and HGI48_RS06460 are separated by 69 nucleotidesHGI48_RS06460 and HGI48_RS06465 overlap by 7 nucleotides HGI48_RS06445: HGI48_RS06445 - DUF1722 domain-containing protein, at 1,366,728 to 1,367,687 _RS06445 HGI48_RS06450: HGI48_RS06450 - deoxyribodipyrimidine photo-lyase, at 1,367,716 to 1,369,146 _RS06450 HGI48_RS06455: HGI48_RS06455 - type 2 GTP cyclohydrolase I, at 1,369,195 to 1,369,938 _RS06455 HGI48_RS06460: HGI48_RS06460 - 5-oxoprolinase subunit PxpB, at 1,370,008 to 1,370,667 _RS06460 HGI48_RS06465: HGI48_RS06465 - biotin-dependent carboxyltransferase family protein, at 1,370,661 to 1,371,590 _RS06465
Group Condition HGI48_RS06445 HGI48_RS06450 HGI48_RS06455 HGI48_RS06460 HGI48_RS06465
plant Atlantic +0.6 +0.3 -2.9 -0.0 +0.2
control LB -0.1 +0.0 -1.6 -0.0 -0.1
carbon source M9+glycerol -0.0 -0.4 -0.3 -0.2 -0.2
plant Norland +0.0 -0.1 -1.1 +0.2 -0.1
plant Atlantic +0.1 -0.0 -1.2 -0.2 +0.3
plant Atlantic +0.3 -0.0 -1.2 -0.1 +0.1
plant Atlantic -0.8 +0.3 +0.1 -0.3 -0.1
plant Norland -0.6 +0.2 +0.1 -0.2 -0.3
plant Upstate -0.0 +0.3 -0.6 -0.4 +0.1
plant Norland -0.0 -0.0 +0.2 -0.6 -0.1
plant Atlantic -0.0 +0.2 -0.4 -0.0 -0.3
control PDB -0.3 -0.2 -0.0 -0.3 +0.4
plant Upstate -0.5 +0.2 -0.3 -0.2 +0.4
carbon source M9+glycerol -0.2 +0.3 -0.4 +0.2 -0.1
plant Norland +0.5 +0.1 -0.9 -0.1 +0.2
plant Atlantic +0.2 +0.4 +0.0 -0.2 -0.6
control PDB +0.0 +0.1 -0.8 +0.1 +0.5
plant Norland +0.3 -0.2 -0.2 -0.1 +0.2
carbon source M9+polygalacturonate -0.0 -0.3 +0.0 -0.3 +0.7
carbon source M9+glycerol +0.1 +0.3 +0.0 -0.4 +0.2
plant Norland +0.4 +0.1 -0.3 +0.1 +0.0
carbon source M9+sucrose +0.1 -0.2 +0.7 -0.2 +0.1
carbon source M9+glycerol +0.2 -0.3 +0.9 +0.1 -0.2
carbon source M9+polygalacturonate -0.1 +0.4 +0.9 +0.1 -0.5
control PDB +0.2 +0.1 +0.7 -0.2 +0.0
plant Upstate +0.3 +0.1 +0.4 -0.1 +0.2
control PDB -0.2 +0.2 +0.7 -0.1 +0.3
carbon source M9+sucrose -0.1 -0.1 +1.6 -0.7 +0.2
carbon source M9+polygalacturonate +0.3 +0.1 +0.8 -0.1 +0.1
carbon source M9+sucrose -0.1 +0.3 +2.3 -0.0 +0.3
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