Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS06240 and HGI48_RS06245 are separated by 15 nucleotidesHGI48_RS06245 and HGI48_RS06250 are separated by 258 nucleotidesHGI48_RS06250 and HGI48_RS06255 are separated by 64 nucleotidesHGI48_RS06255 and HGI48_RS06260 overlap by 1 nucleotides HGI48_RS06240: HGI48_RS06240 - LPS assembly lipoprotein LptE, at 1,324,933 to 1,325,487 _RS06240 HGI48_RS06245: HGI48_RS06245 - leucine--tRNA ligase, at 1,325,503 to 1,328,085 _RS06245 HGI48_RS06250: HGI48_RS06250 - zinc ribbon-containing protein, at 1,328,344 to 1,328,826 _RS06250 HGI48_RS06255: HGI48_RS06255 - amino acid ABC transporter ATP-binding protein, at 1,328,891 to 1,329,616 _RS06255 HGI48_RS06260: HGI48_RS06260 - glutamate/aspartate ABC transporter permease GltK, at 1,329,616 to 1,330,290 _RS06260
Group Condition HGI48_RS06240 HGI48_RS06245 HGI48_RS06250 HGI48_RS06255 HGI48_RS06260
plant Atlantic N.D. N.D. -1.2 +0.4 -0.2
plant Atlantic N.D. N.D. -1.2 +0.4 -0.0
plant Upstate N.D. N.D. -0.2 -0.6 +0.1
carbon source M9+sucrose N.D. N.D. -0.4 +0.4 -0.6
control LB N.D. N.D. -0.1 -0.3 -0.1
control PDB N.D. N.D. -0.4 -0.0 -0.1
plant Norland N.D. N.D. -0.4 +0.3 -0.2
carbon source M9+sucrose N.D. N.D. -0.4 +0.3 -0.2
carbon source M9+glycerol N.D. N.D. -0.9 +0.6 +0.1
plant Norland N.D. N.D. -0.2 +0.3 -0.3
carbon source M9+sucrose N.D. N.D. +0.3 -0.4 -0.2
plant Upstate N.D. N.D. -0.6 +0.2 +0.3
plant Upstate N.D. N.D. -0.2 +0.4 -0.2
plant Norland N.D. N.D. +0.1 -0.3 +0.1
control LB N.D. N.D. -0.2 +0.3 -0.1
plant Upstate N.D. N.D. -0.4 +0.4 +0.0
carbon source M9+polygalacturonate N.D. N.D. -0.3 +0.5 -0.2
carbon source M9+polygalacturonate N.D. N.D. -0.4 +0.6 -0.0
control PDB N.D. N.D. +0.6 -0.4 +0.2
plant Atlantic N.D. N.D. +0.2 +0.2 +0.1
control PDB N.D. N.D. +0.6 -0.3 +0.2
control PDB N.D. N.D. +0.7 -0.1 -0.1
control PDB N.D. N.D. +0.2 +0.3 +0.2
carbon source M9+polygalacturonate N.D. N.D. +0.2 +0.3 +0.2
carbon source M9+glycerol N.D. N.D. -0.0 +0.4 +0.3
plant Atlantic N.D. N.D. +0.9 -0.1 -0.1
control PDB N.D. N.D. +0.4 +0.3 +0.1
carbon source M9+glycerol N.D. N.D. +0.7 +0.2 +0.1
carbon source M9+glycerol N.D. N.D. +0.7 +0.8 +0.1
plant Atlantic N.D. N.D. -0.0 +1.2 +0.5
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