Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05970 and HGI48_RS05975 overlap by 1 nucleotidesHGI48_RS05975 and HGI48_RS05980 overlap by 13 nucleotidesHGI48_RS05980 and HGI48_RS05985 are separated by 206 nucleotidesHGI48_RS05985 and HGI48_RS05990 are separated by 123 nucleotides HGI48_RS05970: HGI48_RS05970 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,270,494 to 1,271,351 _RS05970 HGI48_RS05975: HGI48_RS05975 - o-succinylbenzoate synthase, at 1,271,351 to 1,272,319 _RS05975 HGI48_RS05980: HGI48_RS05980 - o-succinylbenzoate--CoA ligase, at 1,272,307 to 1,273,677 _RS05980 HGI48_RS05985: HGI48_RS05985 - membrane protein, at 1,273,884 to 1,274,429 _RS05985 HGI48_RS05990: HGI48_RS05990 - IS1182 family transposase, at 1,274,553 to 1,276,037 _RS05990
Group Condition HGI48_RS05970 HGI48_RS05975 HGI48_RS05980 HGI48_RS05985 HGI48_RS05990
carbon source M9+glycerol -0.0 -0.3 -0.3 -0.1 N.D.
plant Upstate -0.4 -0.1 -0.3 +0.1 N.D.
plant Norland -0.5 -0.2 -0.1 +0.2 N.D.
plant Upstate +0.2 -0.2 -0.5 +0.0 N.D.
plant Atlantic -0.3 -0.1 -0.2 +0.2 N.D.
carbon source M9+glycerol -0.0 -0.0 -0.5 +0.1 N.D.
plant Atlantic +0.3 +0.1 -0.6 -0.2 N.D.
carbon source M9+glycerol -0.3 +0.1 -0.1 -0.1 N.D.
control LB -0.0 +0.1 -0.4 -0.1 N.D.
control LB -0.1 +0.1 -0.1 -0.1 N.D.
plant Upstate +0.0 +0.2 -0.4 -0.0 N.D.
plant Atlantic -0.7 +0.2 +0.2 +0.2 N.D.
control PDB +0.0 +0.2 +0.0 -0.3 N.D.
carbon source M9+polygalacturonate -0.3 +0.3 +0.1 +0.0 N.D.
control PDB -0.1 +0.3 +0.0 -0.1 N.D.
plant Atlantic +0.2 -0.0 -0.1 +0.2 N.D.
control PDB -0.1 +0.5 -0.0 -0.1 N.D.
carbon source M9+sucrose -0.2 +0.4 +0.1 -0.0 N.D.
carbon source M9+sucrose +0.0 +0.0 +0.4 -0.1 N.D.
plant Upstate +0.4 +0.1 -0.2 +0.1 N.D.
carbon source M9+glycerol -0.0 +0.2 +0.0 +0.2 N.D.
carbon source M9+sucrose +0.4 +0.1 -0.1 +0.1 N.D.
carbon source M9+glycerol +0.3 +0.2 -0.1 +0.2 N.D.
plant Atlantic +0.2 +0.5 -0.1 +0.0 N.D.
control PDB +0.4 +0.4 -0.1 -0.1 N.D.
control PDB +0.4 +0.3 -0.1 +0.0 N.D.
control PDB +0.5 +0.4 -0.2 +0.1 N.D.
carbon source M9+polygalacturonate -0.0 +0.3 +0.4 +0.2 N.D.
carbon source M9+polygalacturonate +0.7 +0.6 +0.4 +0.1 N.D.
plant Atlantic +0.7 +0.5 +0.3 +0.4 N.D.
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HGI48_RS05970
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HGI48_RS05975
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HGI48_RS05990
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