Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05960 and HGI48_RS05965 overlap by 1 nucleotidesHGI48_RS05965 and HGI48_RS05970 overlap by 17 nucleotidesHGI48_RS05970 and HGI48_RS05975 overlap by 1 nucleotidesHGI48_RS05975 and HGI48_RS05980 overlap by 13 nucleotides HGI48_RS05960: HGI48_RS05960 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 1,268,043 to 1,269,719 _RS05960 HGI48_RS05965: HGI48_RS05965 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,269,719 to 1,270,510 _RS05965 HGI48_RS05970: HGI48_RS05970 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,270,494 to 1,271,351 _RS05970 HGI48_RS05975: HGI48_RS05975 - o-succinylbenzoate synthase, at 1,271,351 to 1,272,319 _RS05975 HGI48_RS05980: HGI48_RS05980 - o-succinylbenzoate--CoA ligase, at 1,272,307 to 1,273,677 _RS05980
Group Condition HGI48_RS05960 HGI48_RS05965 HGI48_RS05970 HGI48_RS05975 HGI48_RS05980
plant Norland -0.1 -0.2 -0.5 -0.2 -0.1
plant Upstate +0.0 -0.2 -0.4 -0.1 -0.3
carbon source M9+glycerol +0.2 -0.4 -0.0 -0.3 -0.3
plant Atlantic -0.1 -0.4 -0.7 +0.2 +0.2
control LB -0.2 -0.3 -0.1 +0.1 -0.1
carbon source M9+glycerol +0.3 -0.3 -0.0 -0.0 -0.5
plant Atlantic +0.0 +0.1 -0.3 -0.1 -0.2
carbon source M9+glycerol +0.1 -0.3 -0.3 +0.1 -0.1
control LB +0.2 -0.3 -0.0 +0.1 -0.4
plant Norland +0.2 -0.3 -0.0 +0.0 -0.3
plant Upstate +0.2 +0.0 +0.2 -0.2 -0.5
plant Atlantic +0.5 -0.5 +0.3 +0.1 -0.6
plant Upstate -0.0 -0.4 +0.4 +0.1 -0.2
carbon source M9+glycerol +0.2 -0.5 +0.3 +0.2 -0.1
carbon source M9+polygalacturonate +0.4 -0.2 -0.3 +0.3 +0.1
carbon source M9+glycerol +0.5 -0.2 -0.0 +0.2 +0.0
carbon source M9+sucrose -0.0 +0.2 +0.4 +0.1 -0.1
plant Atlantic -0.5 +0.5 +0.2 +0.5 -0.1
carbon source M9+sucrose +0.1 +0.2 -0.2 +0.4 +0.1
carbon source M9+glycerol +0.3 -0.1 +0.4 +0.0 -0.0
carbon source M9+sucrose -0.0 +0.3 +0.0 +0.0 +0.4
control PDB +0.4 -0.0 -0.1 +0.5 -0.0
control PDB +0.3 +0.3 +0.0 +0.2 +0.0
control PDB +0.4 +0.3 -0.1 +0.3 +0.0
control PDB +0.2 -0.0 +0.5 +0.4 -0.2
plant Atlantic -0.3 -0.3 +0.7 +0.5 +0.3
carbon source M9+polygalacturonate +0.0 +0.3 -0.0 +0.3 +0.4
control PDB +0.2 +0.1 +0.4 +0.4 -0.1
control PDB +0.3 +0.2 +0.4 +0.3 -0.1
carbon source M9+polygalacturonate +0.3 -0.0 +0.7 +0.6 +0.4
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