Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05950 and HGI48_RS05955 are separated by 1010 nucleotidesHGI48_RS05955 and HGI48_RS05960 are separated by 98 nucleotidesHGI48_RS05960 and HGI48_RS05965 overlap by 1 nucleotidesHGI48_RS05965 and HGI48_RS05970 overlap by 17 nucleotides HGI48_RS05950: HGI48_RS05950 - hypothetical protein, at 1,265,336 to 1,265,605 _RS05950 HGI48_RS05955: HGI48_RS05955 - isochorismate synthase MenF, at 1,266,616 to 1,267,944 _RS05955 HGI48_RS05960: HGI48_RS05960 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 1,268,043 to 1,269,719 _RS05960 HGI48_RS05965: HGI48_RS05965 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,269,719 to 1,270,510 _RS05965 HGI48_RS05970: HGI48_RS05970 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,270,494 to 1,271,351 _RS05970
Group Condition HGI48_RS05950 HGI48_RS05955 HGI48_RS05960 HGI48_RS05965 HGI48_RS05970
plant Atlantic N.D. +0.0 -0.1 -0.4 -0.7
plant Norland N.D. -0.1 -0.1 -0.2 -0.5
control LB N.D. -0.1 -0.2 -0.3 -0.1
plant Upstate N.D. -0.1 +0.0 -0.2 -0.4
carbon source M9+glycerol N.D. -0.1 +0.1 -0.3 -0.3
carbon source M9+glycerol N.D. -0.3 +0.2 -0.4 -0.0
carbon source M9+sucrose N.D. -0.6 +0.1 +0.2 -0.2
plant Atlantic N.D. -0.2 +0.0 +0.1 -0.3
control LB N.D. -0.3 +0.2 -0.2 -0.1
carbon source M9+glycerol N.D. -0.2 +0.3 -0.3 -0.0
plant Norland N.D. +0.1 +0.1 -0.4 -0.0
control LB N.D. -0.1 +0.2 -0.3 -0.0
plant Atlantic N.D. -0.5 +0.5 -0.5 +0.3
carbon source M9+glycerol N.D. -0.2 +0.2 -0.5 +0.3
carbon source M9+polygalacturonate N.D. -0.0 +0.4 -0.2 -0.3
carbon source M9+sucrose N.D. -0.4 -0.0 +0.3 +0.0
plant Atlantic N.D. -0.2 -0.3 -0.3 +0.7
carbon source M9+glycerol N.D. -0.2 +0.5 -0.2 -0.0
carbon source M9+sucrose N.D. -0.5 -0.0 +0.2 +0.4
plant Upstate N.D. +0.3 -0.0 -0.4 +0.4
plant Atlantic N.D. +0.1 -0.5 +0.5 +0.2
carbon source M9+glycerol N.D. -0.2 +0.3 -0.1 +0.4
carbon source M9+polygalacturonate N.D. +0.2 +0.0 +0.3 -0.0
control PDB N.D. +0.3 +0.4 -0.0 -0.1
control PDB N.D. +0.2 +0.4 +0.3 -0.1
control PDB N.D. +0.2 +0.3 +0.3 +0.0
control PDB N.D. +0.2 +0.2 +0.1 +0.4
control PDB N.D. +0.3 +0.2 -0.0 +0.5
control PDB N.D. +0.2 +0.3 +0.2 +0.4
carbon source M9+polygalacturonate N.D. +0.2 +0.3 -0.0 +0.7
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