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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS05915 and HGI48_RS05920 are separated by 176 nucleotides
HGI48_RS05920 and HGI48_RS05925 are separated by 535 nucleotides
HGI48_RS05925 and HGI48_RS05930 are separated by 401 nucleotides
HGI48_RS05930 and HGI48_RS05935 are separated by 124 nucleotides
HGI48_RS05915: HGI48_RS05915 - ribonucleotide-diphosphate reductase subunit beta, at 1,251,088 to 1,252,218
_RS05915
HGI48_RS05920: HGI48_RS05920 - ribonucleoside-diphosphate reductase subunit alpha, at 1,252,395 to 1,254,683
_RS05920
HGI48_RS05925: HGI48_RS05925 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 1,255,219 to 1,255,938
_RS05925
HGI48_RS05930: HGI48_RS05930 - DNA topoisomerase (ATP-hydrolyzing) subunit A, at 1,256,340 to 1,258,973
_RS05930
HGI48_RS05935: HGI48_RS05935 - two-component system sensor histidine kinase RcsC, at 1,259,098 to 1,261,962
_RS05935
Group
Condition
HGI48
_RS05915
HGI48
_RS05920
HGI48
_RS05925
HGI48
_RS05930
HGI48
_RS05935
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.1
plant
Norland
N.D.
N.D.
N.D.
N.D.
-0.1
control
LB
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.0
control
LB
N.D.
N.D.
N.D.
N.D.
+0.0
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.1
control
LB
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.1
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.1
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.1
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.3
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