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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS05850 and HGI48_RS05855 are separated by 243 nucleotides
HGI48_RS05855 and HGI48_RS05860 are separated by 69 nucleotides
HGI48_RS05860 and HGI48_RS05865 are separated by 524 nucleotides
HGI48_RS05865 and HGI48_RS05870 are separated by 357 nucleotides
HGI48_RS05850: HGI48_RS05850 - adenylate kinase, at 1,234,773 to 1,235,420
_RS05850
HGI48_RS05855: HGI48_RS05855 - ferrochelatase, at 1,235,664 to 1,236,626
_RS05855
HGI48_RS05860: HGI48_RS05860 - Kef family K(+) transporter, at 1,236,696 to 1,238,381
_RS05860
HGI48_RS05865: HGI48_RS05865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,238,906 to 1,240,558
_RS05865
HGI48_RS05870: HGI48_RS05870 - cache domain-containing protein, at 1,240,916 to 1,242,502
_RS05870
Group
Condition
HGI48
_RS05850
HGI48
_RS05855
HGI48
_RS05860
HGI48
_RS05865
HGI48
_RS05870
plant
Atlantic
N.D.
N.D.
-1.8
-0.1
+0.3
plant
Norland
N.D.
N.D.
-1.3
-0.3
+0.0
carbon source
M9+glycerol
N.D.
N.D.
-0.9
-0.2
-0.0
carbon source
M9+glycerol
N.D.
N.D.
-1.0
-0.2
+0.0
plant
Upstate
N.D.
N.D.
-0.9
+0.0
+0.1
plant
Upstate
N.D.
N.D.
-0.7
-0.1
+0.0
carbon source
M9+glycerol
N.D.
N.D.
-0.6
-0.3
+0.2
plant
Norland
N.D.
N.D.
-0.8
-0.1
+0.2
plant
Upstate
N.D.
N.D.
-0.5
-0.3
+0.1
plant
Atlantic
N.D.
N.D.
-0.7
-0.0
+0.1
control
PDB
N.D.
N.D.
-0.0
-0.4
-0.1
plant
Atlantic
N.D.
N.D.
-0.3
-0.3
+0.1
control
PDB
N.D.
N.D.
-0.0
-0.3
-0.2
control
PDB
N.D.
N.D.
-0.0
-0.2
-0.2
plant
Atlantic
N.D.
N.D.
-0.5
-0.4
+0.5
control
LB
N.D.
N.D.
-0.3
-0.2
+0.2
control
LB
N.D.
N.D.
-0.3
-0.1
+0.0
plant
Norland
N.D.
N.D.
-0.6
+0.1
+0.1
plant
Norland
N.D.
N.D.
-0.4
+0.0
+0.0
plant
Upstate
N.D.
N.D.
-0.7
+0.2
+0.2
plant
Norland
N.D.
N.D.
-0.5
-0.0
+0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
-0.4
+0.1
+0.0
plant
Atlantic
N.D.
N.D.
+0.0
-0.4
+0.1
control
PDB
N.D.
N.D.
+0.1
-0.2
-0.2
carbon source
M9+glycerol
N.D.
N.D.
+0.1
-0.2
+0.1
plant
Upstate
N.D.
N.D.
-0.4
+0.2
+0.2
carbon source
M9+sucrose
N.D.
N.D.
+0.2
+0.2
-0.2
carbon source
M9+sucrose
N.D.
N.D.
-0.1
+0.4
-0.0
carbon source
M9+sucrose
N.D.
N.D.
+0.3
+0.3
-0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
+0.4
+0.4
-0.2
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