Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS05725 and HGI48_RS05730 are separated by 77 nucleotidesHGI48_RS05730 and HGI48_RS05735 overlap by 8 nucleotidesHGI48_RS05735 and HGI48_RS05740 are separated by 294 nucleotidesHGI48_RS05740 and HGI48_RS05745 are separated by 42 nucleotides HGI48_RS05725: HGI48_RS05725 - Lrp/AsnC ligand binding domain-containing protein, at 1,207,919 to 1,208,380 _RS05725 HGI48_RS05730: HGI48_RS05730 - SmdA family multidrug ABC transporter permease/ATP-binding protein, at 1,208,458 to 1,210,224 _RS05730 HGI48_RS05735: HGI48_RS05735 - SmdB family multidrug efflux ABC transporter permease/ATP-binding protein, at 1,210,217 to 1,212,010 _RS05735 HGI48_RS05740: HGI48_RS05740 - P-II family nitrogen regulator, at 1,212,305 to 1,212,643 _RS05740 HGI48_RS05745: HGI48_RS05745 - ammonium transporter AmtB, at 1,212,686 to 1,213,978 _RS05745
Group Condition HGI48_RS05725 HGI48_RS05730 HGI48_RS05735 HGI48_RS05740 HGI48_RS05745
control PDB -0.2 -1.3 -1.3 -0.7 -0.4
control PDB +0.3 -1.7 -1.0 -0.5 -0.4
control PDB +0.0 -1.6 -1.3 -0.3 -0.3
control PDB -0.2 -1.7 -1.4 -0.0 +0.0
control PDB +0.0 -1.4 -1.3 -0.3 +0.0
control PDB +0.1 -1.4 -1.2 -0.2 -0.1
carbon source M9+sucrose -0.4 -1.5 -0.8 +0.3 +0.0
carbon source M9+sucrose -0.2 -1.1 -1.1 -0.1 +0.2
carbon source M9+sucrose -0.3 -1.2 -1.3 +0.7 -0.0
plant Atlantic +0.1 -0.8 -0.6 -0.6 -0.0
plant Atlantic +0.0 -0.4 -0.7 -0.4 -0.4
plant Upstate +0.0 -0.5 -0.6 -0.6 -0.2
plant Atlantic +0.3 -0.3 -0.2 -1.1 -0.2
plant Upstate +0.1 -0.4 -0.3 -0.9 +0.0
plant Atlantic +0.1 -0.5 -0.4 -0.5 -0.1
carbon source M9+polygalacturonate -0.5 -0.6 -0.5 -0.2 +0.4
carbon source M9+polygalacturonate -0.2 -0.5 -0.5 +0.2 +0.0
control LB +0.2 -0.4 -0.3 -0.4 -0.1
plant Upstate +0.3 -0.5 -0.6 +0.1 -0.2
plant Norland +0.3 -0.2 -0.3 -0.5 -0.0
plant Norland +0.3 -0.4 -0.6 +0.0 +0.0
carbon source M9+polygalacturonate -0.2 -0.7 -0.4 +0.4 +0.5
plant Upstate +0.2 -0.6 -0.3 +0.5 -0.1
plant Norland +0.3 -0.5 -0.2 +0.3 -0.0
carbon source M9+glycerol +0.1 -0.4 -0.3 +1.8 -0.0
carbon source M9+glycerol +0.3 -0.1 -0.3 +1.5 -0.3
carbon source M9+glycerol +0.4 -0.2 -0.2 +1.4 -0.1
carbon source M9+glycerol +0.2 -0.3 -0.6 +2.1 -0.1
carbon source M9+glycerol -0.0 -0.2 -0.4 +2.1 -0.1
carbon source M9+glycerol +0.1 -0.5 -0.4 +2.4 +0.0
remove
HGI48_RS05725
plot
remove
HGI48_RS05730
plot
remove
HGI48_RS05735
remove
HGI48_RS05740
plot
remove
HGI48_RS05745
plot