Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05710 and HGI48_RS05715 are separated by 112 nucleotidesHGI48_RS05715 and HGI48_RS05720 are separated by 126 nucleotidesHGI48_RS05720 and HGI48_RS05725 are separated by 177 nucleotidesHGI48_RS05725 and HGI48_RS05730 are separated by 77 nucleotides HGI48_RS05710: HGI48_RS05710 - helix-hairpin-helix domain-containing protein, at 1,205,380 to 1,205,754 _RS05710 HGI48_RS05715: HGI48_RS05715 - 7-cyano-7-deazaguanine synthase QueC, at 1,205,867 to 1,206,562 _RS05715 HGI48_RS05720: HGI48_RS05720 - PLP-dependent cysteine synthase family protein, at 1,206,689 to 1,207,741 _RS05720 HGI48_RS05725: HGI48_RS05725 - Lrp/AsnC ligand binding domain-containing protein, at 1,207,919 to 1,208,380 _RS05725 HGI48_RS05730: HGI48_RS05730 - SmdA family multidrug ABC transporter permease/ATP-binding protein, at 1,208,458 to 1,210,224 _RS05730
Group Condition HGI48_RS05710 HGI48_RS05715 HGI48_RS05720 HGI48_RS05725 HGI48_RS05730
carbon source M9+sucrose -0.7 -0.4 -0.5 -0.4 -1.5
carbon source M9+sucrose -0.1 -0.1 -0.2 -0.3 -1.2
control PDB -0.2 +0.5 +0.0 -0.2 -1.7
control PDB -0.1 +0.3 -0.2 +0.3 -1.7
control PDB -0.1 +0.4 -0.2 +0.0 -1.6
plant Atlantic +0.3 -1.0 +0.2 +0.1 -0.8
carbon source M9+sucrose +0.3 +0.3 -0.4 -0.2 -1.1
carbon source M9+polygalacturonate +0.2 -0.2 -0.1 -0.5 -0.6
control PDB +0.2 +0.5 -0.2 -0.2 -1.3
control PDB -0.1 +0.6 +0.2 +0.0 -1.4
plant Norland -0.4 -0.1 -0.0 +0.3 -0.4
plant Norland -0.3 -0.2 +0.2 +0.1 -0.4
control PDB +0.3 +0.4 +0.1 +0.1 -1.4
plant Norland -0.2 -0.3 +0.4 +0.3 -0.5
plant Upstate -0.1 -0.1 +0.1 +0.3 -0.5
plant Atlantic +0.4 -0.4 +0.1 +0.0 -0.4
carbon source M9+polygalacturonate +0.8 -0.0 -0.0 -0.2 -0.7
carbon source M9+glycerol -0.2 +0.1 +0.2 +0.2 -0.3
plant Upstate -0.1 +0.3 +0.2 +0.1 -0.4
plant Upstate +0.0 -0.3 +0.7 -0.0 -0.3
carbon source M9+polygalacturonate +0.2 +0.3 +0.2 -0.2 -0.5
plant Upstate +0.4 +0.2 +0.1 +0.0 -0.5
plant Upstate +0.2 +0.2 +0.2 +0.2 -0.6
plant Atlantic +0.4 -0.4 +0.2 +0.3 -0.3
control LB +0.2 +0.0 +0.2 +0.2 -0.4
carbon source M9+glycerol +0.3 +0.0 +0.3 +0.1 -0.5
carbon source M9+glycerol +0.5 +0.2 +0.3 +0.1 -0.4
carbon source M9+glycerol +0.5 -0.2 +0.0 +0.3 -0.1
plant Atlantic +0.4 +0.6 +0.4 -0.0 +0.1
carbon source M9+glycerol +0.9 +0.4 +0.3 +0.4 -0.2
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