Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05680 and HGI48_RS05685 are separated by 434 nucleotidesHGI48_RS05685 and HGI48_RS05690 are separated by 126 nucleotidesHGI48_RS05690 and HGI48_RS05695 are separated by 188 nucleotidesHGI48_RS05695 and HGI48_RS05700 are separated by 194 nucleotides HGI48_RS05680: HGI48_RS05680 - trigger factor, at 1,196,323 to 1,197,627 _RS05680 HGI48_RS05685: HGI48_RS05685 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 1,198,062 to 1,198,685 _RS05685 HGI48_RS05690: HGI48_RS05690 - ATP-dependent protease ATP-binding subunit ClpX, at 1,198,812 to 1,200,086 _RS05690 HGI48_RS05695: HGI48_RS05695 - endopeptidase La, at 1,200,275 to 1,202,638 _RS05695 HGI48_RS05700: HGI48_RS05700 - DNA-binding protein HU-beta, at 1,202,833 to 1,203,105 _RS05700
Group Condition HGI48_RS05680 HGI48_RS05685 HGI48_RS05690 HGI48_RS05695 HGI48_RS05700
plant Atlantic -1.0 N.D. -2.3 -1.0 -4.3
plant Atlantic -0.5 N.D. -0.2 -0.1 -3.6
plant Upstate -0.7 N.D. -0.7 -0.6 -1.2
plant Atlantic -0.9 N.D. -0.4 -0.3 -1.5
plant Atlantic -0.8 N.D. -1.0 -1.1 -0.2
plant Upstate -0.7 N.D. -0.9 -0.4 -1.0
carbon source M9+sucrose -0.7 N.D. -1.1 -0.6 -0.3
carbon source M9+polygalacturonate +0.6 N.D. -0.4 -0.9 -1.5
plant Norland -0.5 N.D. -0.5 -0.8 -0.3
carbon source M9+sucrose -0.4 N.D. -1.0 -1.0 +0.5
plant Upstate -0.4 N.D. -0.2 -0.7 -0.5
carbon source M9+polygalacturonate +0.7 N.D. -1.9 -0.8 +0.6
plant Norland -0.4 N.D. +0.5 -0.2 -1.3
control LB -0.2 N.D. +0.1 -0.3 -0.9
plant Upstate -0.5 N.D. +0.2 -0.4 -0.5
carbon source M9+sucrose -0.3 N.D. -0.5 -1.1 +0.7
carbon source M9+glycerol -0.6 N.D. +0.4 +0.6 -1.1
plant Upstate +0.3 N.D. +0.5 -1.0 -0.1
carbon source M9+polygalacturonate +0.3 N.D. -0.5 -0.8 +1.5
control PDB -0.1 N.D. -0.1 +1.2 -0.4
carbon source M9+glycerol +0.5 N.D. +0.3 +1.0 -1.1
carbon source M9+glycerol -0.2 N.D. +0.4 +1.7 -1.2
control PDB -0.2 N.D. +0.2 +1.5 -0.3
control PDB -0.3 N.D. +0.8 +1.4 -0.7
carbon source M9+glycerol -0.3 N.D. +0.1 +1.6 +0.1
carbon source M9+glycerol -0.7 N.D. +0.3 +1.7 +0.4
carbon source M9+glycerol +0.1 N.D. +0.1 +1.6 -0.0
control PDB -0.0 N.D. +0.8 +1.5 -0.5
control PDB -0.1 N.D. +0.9 +1.1 +0.4
control PDB -0.0 N.D. +1.0 +1.6 +1.0
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