Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS05485 and HGI48_RS05490 are separated by 27 nucleotidesHGI48_RS05490 and HGI48_RS05495 are separated by 80 nucleotidesHGI48_RS05495 and HGI48_RS05500 are separated by 268 nucleotidesHGI48_RS05500 and HGI48_RS05505 are separated by 469 nucleotides HGI48_RS05485: HGI48_RS05485 - phosphate response regulator transcription factor PhoB, at 1,153,998 to 1,154,687 _RS05485 HGI48_RS05490: HGI48_RS05490 - phosphate regulon sensor histidine kinase PhoR, at 1,154,715 to 1,156,037 _RS05490 HGI48_RS05495: HGI48_RS05495 - phosphate ABC transporter substrate-binding protein, at 1,156,118 to 1,157,095 _RS05495 HGI48_RS05500: HGI48_RS05500 - cobalamin-independent methionine synthase II family protein, at 1,157,364 to 1,158,470 _RS05500 HGI48_RS05505: HGI48_RS05505 - branched-chain amino acid transport system II carrier protein, at 1,158,940 to 1,160,259 _RS05505
Group Condition HGI48_RS05485 HGI48_RS05490 HGI48_RS05495 HGI48_RS05500 HGI48_RS05505
carbon source M9+polygalacturonate -0.2 +0.1 -1.0 +0.1 +0.2
control PDB -0.2 -0.2 -0.2 -0.0 +0.1
plant Upstate -0.3 -0.2 +0.3 -0.2 -0.1
carbon source M9+sucrose +0.2 +0.1 -0.4 -0.6 +0.3
plant Norland -0.2 -0.0 -0.2 +0.1 -0.1
carbon source M9+glycerol -0.4 -0.1 +0.1 -0.1 +0.2
control PDB -0.1 -0.2 -0.0 -0.3 +0.3
plant Atlantic -0.4 -0.1 +0.3 +0.1 -0.2
plant Atlantic -0.2 -0.0 +0.4 -0.5 +0.1
control LB +0.0 -0.0 -0.1 +0.3 -0.3
carbon source M9+polygalacturonate -0.0 +0.3 -0.7 +0.1 +0.3
carbon source M9+polygalacturonate +0.1 +0.2 -0.5 -0.3 +0.4
carbon source M9+sucrose +0.4 +0.0 -0.3 -0.4 +0.2
plant Upstate -0.2 -0.0 +0.2 -0.1 +0.1
plant Atlantic -0.5 -0.0 +0.7 -0.3 +0.1
plant Atlantic +0.2 -0.3 -0.4 +0.5 +0.0
carbon source M9+glycerol -0.1 -0.0 +0.0 -0.2 +0.3
carbon source M9+sucrose +0.3 +0.2 -0.3 -0.2 +0.1
carbon source M9+glycerol +0.0 -0.2 +0.1 +0.2 +0.0
carbon source M9+glycerol -0.1 -0.1 +0.4 -0.2 +0.2
plant Norland -0.1 -0.1 +0.5 -0.0 -0.1
plant Upstate -0.1 -0.1 +0.3 +0.1 -0.0
control PDB -0.1 +0.2 +0.1 +0.1 +0.0
plant Upstate -0.1 -0.1 +0.2 +0.4 -0.0
control PDB +0.1 -0.2 +0.1 +0.1 +0.3
carbon source M9+glycerol -0.1 +0.0 +0.2 +0.0 +0.3
plant Atlantic -0.1 -0.1 +0.6 -0.2 +0.4
plant Atlantic -0.0 +0.3 +0.2 +0.1 +0.1
plant Norland +0.1 -0.1 +0.4 +0.2 +0.1
control PDB -0.1 +0.1 +0.4 +0.4 +0.1
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