Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS05035 and HGI48_RS05040 overlap by 13 nucleotidesHGI48_RS05040 and HGI48_RS05045 are separated by 3 nucleotidesHGI48_RS05045 and HGI48_RS05050 are separated by 485 nucleotidesHGI48_RS05050 and HGI48_RS05055 are separated by 150 nucleotides HGI48_RS05035: HGI48_RS05035 - tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA, at 1,055,974 to 1,056,807 _RS05035 HGI48_RS05040: HGI48_RS05040 - cysteine desulfurase sulfur acceptor subunit CsdE, at 1,056,795 to 1,057,238 _RS05040 HGI48_RS05045: HGI48_RS05045 - cysteine desulfurase CsdA, at 1,057,242 to 1,058,447 _RS05045 HGI48_RS05050: HGI48_RS05050 - transcriptional regulator GcvA, at 1,058,933 to 1,059,859 _RS05050 HGI48_RS05055: HGI48_RS05055 - DUF423 domain-containing protein, at 1,060,010 to 1,060,396 _RS05055
Group Condition HGI48_RS05035 HGI48_RS05040 HGI48_RS05045 HGI48_RS05050 HGI48_RS05055
control LB -0.8 N.D. -0.1 +0.0 -0.1
control LB -0.4 N.D. -0.2 -0.2 -0.1
plant Atlantic -0.4 N.D. +0.1 -0.5 -0.0
plant Upstate -0.2 N.D. -0.3 -0.1 -0.2
plant Atlantic -0.3 N.D. -0.4 -0.1 +0.0
plant Atlantic -0.3 N.D. -0.1 -0.0 -0.2
plant Upstate -0.2 N.D. -0.3 -0.0 -0.1
plant Upstate -0.7 N.D. -0.1 +0.2 +0.0
plant Upstate +0.0 N.D. -0.1 -0.5 -0.0
plant Norland -0.4 N.D. -0.2 -0.0 +0.2
control LB -0.4 N.D. +0.0 +0.1 -0.1
plant Atlantic -0.1 N.D. -0.3 +0.1 -0.1
carbon source M9+glycerol -0.3 N.D. -0.1 +0.3 -0.2
plant Norland -0.4 N.D. -0.0 +0.2 -0.1
plant Norland -0.0 N.D. +0.1 -0.2 -0.1
carbon source M9+glycerol -0.3 N.D. -0.2 +0.3 -0.1
carbon source M9+glycerol +0.1 N.D. -0.3 -0.1 +0.1
control PDB -0.3 N.D. +0.3 -0.3 +0.2
carbon source M9+polygalacturonate -0.0 N.D. +0.5 -0.5 -0.0
control PDB -0.0 N.D. +0.1 -0.4 +0.3
control LB -0.0 N.D. -0.3 +0.2 +0.1
plant Atlantic -0.4 N.D. -0.1 +0.7 +0.1
carbon source M9+glycerol +0.2 N.D. -0.1 +0.2 +0.1
plant Atlantic -0.2 N.D. -0.0 +0.4 +0.4
plant Upstate +0.2 N.D. -0.1 +0.1 +0.2
carbon source M9+polygalacturonate +0.5 N.D. +0.5 -0.4 -0.1
carbon source M9+polygalacturonate +0.6 N.D. +0.4 -0.4 +0.0
carbon source M9+sucrose +0.8 N.D. +1.0 +0.8 +0.1
carbon source M9+sucrose +0.8 N.D. +1.1 +0.9 +0.1
carbon source M9+sucrose +1.2 N.D. +1.3 +1.0 +0.0
remove
HGI48_RS05035
plot
remove
HGI48_RS05040
plot
remove
HGI48_RS05045
remove
HGI48_RS05050
plot
remove
HGI48_RS05055
plot