Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS04940 and HGI48_RS04945 are separated by 153 nucleotidesHGI48_RS04945 and HGI48_RS04950 are separated by 98 nucleotidesHGI48_RS04950 and HGI48_RS04955 are separated by 771 nucleotidesHGI48_RS04955 and HGI48_RS04960 are separated by 14 nucleotides HGI48_RS04940: HGI48_RS04940 - YgdI/YgdR family lipoprotein, at 1,037,224 to 1,037,442 _RS04940 HGI48_RS04945: HGI48_RS04945 - TerC family protein, at 1,037,596 to 1,038,312 _RS04945 HGI48_RS04950: HGI48_RS04950 - DNA mismatch repair endonuclease MutH, at 1,038,411 to 1,039,097 _RS04950 HGI48_RS04955: HGI48_RS04955 - RNA pyrophosphohydrolase, at 1,039,869 to 1,040,396 _RS04955 HGI48_RS04960: HGI48_RS04960 - phosphoenolpyruvate--protein phosphotransferase, at 1,040,411 to 1,042,657 _RS04960
Group Condition HGI48_RS04940 HGI48_RS04945 HGI48_RS04950 HGI48_RS04955 HGI48_RS04960
plant Atlantic -0.5 -0.8 N.D. N.D. -0.2
plant Norland -0.1 -0.4 N.D. N.D. -0.1
carbon source M9+glycerol -0.3 -0.3 N.D. N.D. +0.1
plant Norland -0.1 -0.2 N.D. N.D. -0.1
plant Atlantic -0.0 -0.3 N.D. N.D. -0.0
carbon source M9+glycerol -0.1 -0.2 N.D. N.D. +0.0
carbon source M9+polygalacturonate -0.1 -0.2 N.D. N.D. +0.0
plant Upstate +0.2 -0.1 N.D. N.D. -0.4
control LB -0.2 -0.1 N.D. N.D. +0.0
control LB +0.1 -0.2 N.D. N.D. -0.1
plant Atlantic +0.1 -0.1 N.D. N.D. -0.2
plant Upstate +0.1 -0.0 N.D. N.D. -0.3
carbon source M9+glycerol -0.2 -0.1 N.D. N.D. +0.2
control PDB -0.3 +0.0 N.D. N.D. +0.2
carbon source M9+sucrose +0.2 -0.1 N.D. N.D. -0.1
plant Norland -0.3 +0.2 N.D. N.D. +0.1
control PDB -0.3 +0.0 N.D. N.D. +0.3
plant Upstate -0.1 +0.3 N.D. N.D. -0.2
control PDB -0.3 +0.1 N.D. N.D. +0.3
plant Norland +0.1 +0.1 N.D. N.D. -0.2
carbon source M9+sucrose +0.2 +0.0 N.D. N.D. -0.2
carbon source M9+glycerol -0.1 +0.1 N.D. N.D. +0.1
plant Upstate +0.2 +0.1 N.D. N.D. -0.1
control PDB -0.1 +0.0 N.D. N.D. +0.4
carbon source M9+glycerol +0.2 +0.0 N.D. N.D. +0.2
plant Atlantic -0.0 +0.5 N.D. N.D. -0.1
plant Norland +0.1 +0.2 N.D. N.D. +0.1
plant Atlantic +0.2 +0.4 N.D. N.D. +0.0
carbon source M9+polygalacturonate +0.4 +0.2 N.D. N.D. +0.2
carbon source M9+polygalacturonate -0.0 +0.6 N.D. N.D. +0.6
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