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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS04750 and HGI48_RS04755 overlap by 4 nucleotides
HGI48_RS04755 and HGI48_RS04760 are separated by 95 nucleotides
HGI48_RS04760 and HGI48_RS04765 are separated by 231 nucleotides
HGI48_RS04765 and HGI48_RS04770 are separated by 67 nucleotides
HGI48_RS04750: HGI48_RS04750 - hypothetical protein, at 995,147 to 995,938
_RS04750
HGI48_RS04755: HGI48_RS04755 - phosphotransferase, at 995,935 to 996,981
_RS04755
HGI48_RS04760: HGI48_RS04760 - hypothetical protein, at 997,077 to 999,779
_RS04760
HGI48_RS04765: HGI48_RS04765 - hypothetical protein, at 1,000,011 to 1,000,655
_RS04765
HGI48_RS04770: HGI48_RS04770 - acyl carrier protein, at 1,000,723 to 1,000,968
_RS04770
Group
Condition
HGI48
_RS04750
HGI48
_RS04755
HGI48
_RS04760
HGI48
_RS04765
HGI48
_RS04770
carbon source
M9+glycerol
+0.2
-0.2
-0.1
-2.0
N.D.
control
PDB
-0.1
-0.4
-0.4
-0.6
N.D.
carbon source
M9+sucrose
-0.0
+0.1
-0.1
-1.2
N.D.
carbon source
M9+sucrose
-0.2
-0.4
-0.3
+0.1
N.D.
carbon source
M9+polygalacturonate
-0.2
-0.4
-0.4
+0.2
N.D.
plant
Atlantic
+0.3
-0.7
-0.2
+0.0
N.D.
control
PDB
+0.1
-0.6
-0.1
+0.1
N.D.
carbon source
M9+polygalacturonate
-0.1
-0.5
-0.1
+0.3
N.D.
carbon source
M9+glycerol
+0.1
-0.8
+0.3
+0.0
N.D.
control
PDB
-0.2
+0.2
-0.4
+0.1
N.D.
control
PDB
+0.1
-0.3
-0.2
+0.2
N.D.
plant
Atlantic
-0.3
+0.8
-0.3
+0.0
N.D.
plant
Norland
+0.4
+0.4
-0.0
-0.3
N.D.
plant
Norland
+0.3
+0.5
-0.2
-0.1
N.D.
plant
Norland
+0.2
-0.5
+0.3
+0.7
N.D.
control
PDB
+0.0
+0.4
-0.3
+0.5
N.D.
plant
Norland
+0.0
+0.9
-0.0
-0.3
N.D.
plant
Atlantic
+0.1
+0.4
-0.1
+0.3
N.D.
carbon source
M9+glycerol
+0.0
+0.7
-0.1
+0.2
N.D.
plant
Atlantic
+0.1
+0.2
-0.0
+0.6
N.D.
carbon source
M9+glycerol
-0.1
+0.5
+0.1
+0.3
N.D.
plant
Atlantic
+0.0
+0.4
+0.3
+0.2
N.D.
plant
Upstate
+0.4
+0.3
-0.0
+0.3
N.D.
carbon source
M9+polygalacturonate
+0.1
-0.3
-0.1
+1.3
N.D.
carbon source
M9+glycerol
+0.2
+0.6
+0.0
+0.2
N.D.
carbon source
M9+glycerol
-0.0
+0.8
-0.0
+0.4
N.D.
plant
Upstate
+0.2
+0.4
+0.3
+0.2
N.D.
plant
Norland
+0.2
+0.7
+0.4
+0.0
N.D.
plant
Upstate
+0.1
+0.5
+0.4
+0.4
N.D.
plant
Upstate
+0.2
+0.6
-0.0
+1.0
N.D.
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