Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS04520 and HGI48_RS04525 are separated by 30 nucleotidesHGI48_RS04525 and HGI48_RS04530 are separated by 62 nucleotidesHGI48_RS04530 and HGI48_RS04535 are separated by 77 nucleotidesHGI48_RS04535 and HGI48_RS04540 are separated by 2 nucleotides HGI48_RS04520: HGI48_RS04520 - DNA oxidative demethylase AlkB, at 947,852 to 948,505 _RS04520 HGI48_RS04525: HGI48_RS04525 - FAD-dependent oxidoreductase, at 948,536 to 950,107 _RS04525 HGI48_RS04530: HGI48_RS04530 - FMN-binding protein, at 950,170 to 950,520 _RS04530 HGI48_RS04535: HGI48_RS04535 - MFS transporter, at 950,598 to 951,977 _RS04535 HGI48_RS04540: HGI48_RS04540 - cytochrome c nitrite reductase subunit NrfD, at 951,980 to 952,936 _RS04540
Group Condition HGI48_RS04520 HGI48_RS04525 HGI48_RS04530 HGI48_RS04535 HGI48_RS04540
carbon source M9+glycerol -0.8 +0.2 -0.4 -0.2 -0.0
plant Atlantic +0.1 +0.2 -1.2 +0.3 -0.4
carbon source M9+glycerol -0.2 -0.0 -0.7 +0.0 -0.1
carbon source M9+glycerol -0.0 -0.4 -0.4 +0.3 -0.3
plant Upstate +0.1 +0.1 -0.5 -0.3 -0.2
control LB -0.0 +0.1 -0.3 -0.5 +0.0
control PDB +0.2 -0.1 -0.2 -0.4 -0.1
plant Norland +0.1 +0.0 -0.5 +0.1 -0.1
control PDB -0.2 +0.2 +0.0 -0.4 +0.0
carbon source M9+sucrose +0.2 -0.1 -0.5 +0.3 -0.2
control PDB +0.5 +0.2 -0.7 -0.0 -0.2
carbon source M9+sucrose +0.0 +0.0 +0.2 -0.4 +0.0
carbon source M9+glycerol +0.3 +0.1 -0.0 -0.2 -0.3
plant Atlantic -0.0 +0.3 +0.1 -0.4 -0.1
carbon source M9+glycerol +0.2 +0.2 -0.2 -0.1 +0.1
plant Upstate -0.1 +0.3 +0.0 -0.2 +0.1
control PDB +0.3 +0.0 -0.3 +0.1 +0.0
plant Atlantic -0.1 +0.3 -0.3 -0.0 +0.4
plant Atlantic +0.6 +0.2 -0.3 -0.0 -0.1
carbon source M9+polygalacturonate -0.0 -0.1 -0.1 +0.8 -0.2
plant Atlantic +0.5 +0.1 -0.4 +0.0 +0.1
carbon source M9+polygalacturonate +0.1 -0.2 -0.0 +0.5 +0.0
control PDB +0.5 +0.2 -0.1 -0.3 +0.2
plant Atlantic +0.1 +0.0 +0.6 -0.1 -0.0
plant Norland +0.4 +0.2 -0.1 +0.2 -0.2
control LB +0.5 +0.3 -0.2 -0.1 +0.1
plant Norland +0.1 +0.3 +0.3 -0.1 +0.2
plant Upstate +0.2 +0.3 +0.2 +0.1 +0.1
carbon source M9+sucrose +0.1 -0.2 +0.3 +0.8 -0.1
plant Norland +0.3 +0.1 +0.7 -0.0 -0.0
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