Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS04500 and HGI48_RS04505 are separated by 463 nucleotidesHGI48_RS04505 and HGI48_RS04510 are separated by 106 nucleotidesHGI48_RS04510 and HGI48_RS04515 are separated by 91 nucleotidesHGI48_RS04515 and HGI48_RS04520 are separated by 98 nucleotides HGI48_RS04500: HGI48_RS04500 - fumarate hydratase, at 943,443 to 945,086 _RS04500 HGI48_RS04505: HGI48_RS04505 - LysR family transcriptional regulator, at 945,550 to 946,416 _RS04505 HGI48_RS04510: HGI48_RS04510 - multidrug/biocide efflux PACE transporter, at 946,523 to 946,987 _RS04510 HGI48_RS04515: HGI48_RS04515 - DNA-3-methyladenine glycosylase 2 family protein, at 947,079 to 947,753 _RS04515 HGI48_RS04520: HGI48_RS04520 - DNA oxidative demethylase AlkB, at 947,852 to 948,505 _RS04520
Group Condition HGI48_RS04500 HGI48_RS04505 HGI48_RS04510 HGI48_RS04515 HGI48_RS04520
carbon source M9+polygalacturonate -0.4 -0.4 -0.1 -0.4 -0.0
plant Norland -0.4 -0.4 -0.2 -0.2 +0.1
plant Upstate -0.3 -0.4 +0.0 -0.3 -0.1
plant Atlantic -0.7 +0.1 -0.2 -0.1 -0.0
carbon source M9+glycerol +0.0 -0.2 -0.3 -0.3 -0.2
carbon source M9+glycerol -0.0 +0.4 -0.2 -0.2 -0.8
plant Norland -0.4 -0.3 -0.2 -0.0 +0.3
carbon source M9+polygalacturonate -0.7 +0.4 +0.0 -0.5 +0.1
control PDB -0.5 +0.1 +0.1 -0.2 -0.0
plant Atlantic -0.2 -0.3 +0.4 -0.3 +0.1
carbon source M9+polygalacturonate -0.3 -0.3 -0.1 +0.2 +0.1
control LB -0.5 +0.2 -0.1 +0.1 -0.0
control PDB -0.5 -0.1 +0.1 +0.4 -0.2
carbon source M9+glycerol -0.0 -0.6 +0.5 -0.2 -0.0
control PDB -0.4 +0.0 -0.2 -0.0 +0.3
plant Atlantic -0.1 +0.2 +0.4 -0.8 +0.1
control LB -0.3 +0.4 -0.0 -0.2 +0.0
control PDB -0.6 -0.0 +0.1 +0.2 +0.2
plant Norland -0.4 +0.1 +0.1 -0.1 +0.3
plant Upstate -0.4 +0.2 +0.0 +0.1 +0.2
carbon source M9+sucrose -0.3 +0.1 +0.1 +0.1 +0.2
control PDB -0.6 +0.1 +0.1 +0.2 +0.5
plant Norland -0.3 +0.6 -0.2 +0.1 +0.1
plant Norland -0.6 +0.4 -0.1 +0.2 +0.4
plant Atlantic -0.2 -0.3 +0.4 -0.2 +0.6
control PDB -0.6 +0.2 +0.1 +0.1 +0.5
control LB -0.5 +0.0 +0.2 +0.2 +0.5
carbon source M9+glycerol +0.2 +0.3 -0.2 +0.1 +0.3
plant Atlantic -0.5 +1.0 -0.2 +0.3 +0.5
carbon source M9+sucrose -0.1 +0.6 +0.3 +0.3 +0.1
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