Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS04280 and HGI48_RS04285 are separated by 202 nucleotidesHGI48_RS04285 and HGI48_RS04290 are separated by 76 nucleotidesHGI48_RS04290 and HGI48_RS04300 are separated by 598 nucleotidesHGI48_RS04300 and HGI48_RS04305 are separated by 155 nucleotides HGI48_RS04280: HGI48_RS04280 - hypothetical protein, at 897,671 to 898,135 _RS04280 HGI48_RS04285: HGI48_RS04285 - hypothetical protein, at 898,338 to 900,083 _RS04285 HGI48_RS04290: HGI48_RS04290 - tyrosine-type recombinase/integrase, at 900,160 to 901,380 _RS04290 HGI48_RS04300: HGI48_RS04300 - SsrA-binding protein SmpB, at 901,979 to 902,461 _RS04300 HGI48_RS04305: HGI48_RS04305 - type II toxin-antitoxin system RatA family toxin, at 902,617 to 903,051 _RS04305
Group Condition HGI48_RS04280 HGI48_RS04285 HGI48_RS04290 HGI48_RS04300 HGI48_RS04305
carbon source M9+polygalacturonate N.D. -0.6 -0.1 -0.7 -0.4
carbon source M9+sucrose N.D. -0.2 -0.1 -0.5 -0.6
plant Upstate N.D. -0.1 +0.1 +0.4 -1.7
plant Norland N.D. +0.0 -0.1 +0.2 -1.3
plant Atlantic N.D. -0.0 -0.3 +0.0 -0.8
plant Upstate N.D. +0.2 -0.0 -0.5 -0.7
carbon source M9+sucrose N.D. -0.1 -0.0 +0.4 -1.1
plant Atlantic N.D. +0.1 -0.1 +0.1 -0.9
plant Norland N.D. -0.1 -0.2 +0.1 -0.6
control LB N.D. +0.0 -0.1 +0.4 -0.9
plant Norland N.D. +0.1 +0.1 +0.1 -0.8
control LB N.D. +0.1 +0.1 +0.3 -1.0
control LB N.D. -0.3 +0.2 +0.5 -0.9
control PDB N.D. -0.5 -0.1 -0.2 +0.3
plant Atlantic N.D. -0.1 +0.3 -0.1 -0.4
carbon source M9+polygalacturonate N.D. -0.4 -0.1 +0.2 +0.0
plant Norland N.D. -0.1 +0.1 +0.7 -1.1
plant Norland N.D. +0.0 -0.0 +0.6 -0.8
control PDB N.D. -0.4 -0.1 -0.0 +0.4
plant Upstate N.D. -0.1 +0.0 +0.7 -0.7
plant Atlantic N.D. +0.0 +0.3 -0.3 +0.2
control PDB N.D. -0.1 -0.1 +0.5 +0.2
control PDB N.D. -0.6 -0.0 +0.4 +0.7
plant Upstate N.D. -0.1 +0.1 +0.6 -0.0
plant Atlantic N.D. -0.3 +0.2 +0.7 +0.0
control PDB N.D. -0.3 +0.1 +0.2 +0.7
control PDB N.D. -0.4 -0.1 +0.6 +0.8
plant Atlantic N.D. +0.5 +0.3 +0.3 +0.1
carbon source M9+glycerol N.D. -0.0 +0.1 +1.2 +0.0
carbon source M9+glycerol N.D. +0.3 +0.1 +0.6 +0.4
remove
HGI48_RS04280
plot
remove
HGI48_RS04285
plot
remove
HGI48_RS04290
remove
HGI48_RS04300
plot
remove
HGI48_RS04305
plot