Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS04210 and HGI48_RS04215 overlap by 17 nucleotidesHGI48_RS04215 and HGI48_RS04220 are separated by 138 nucleotidesHGI48_RS04220 and HGI48_RS04225 are separated by 694 nucleotidesHGI48_RS04225 and HGI48_RS04230 are separated by 584 nucleotides HGI48_RS04210: HGI48_RS04210 - type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein, at 886,768 to 887,313 _RS04210 HGI48_RS04215: HGI48_RS04215 - nucleotidyl transferase AbiEii/AbiGii toxin family protein, at 887,297 to 888,214 _RS04215 HGI48_RS04220: HGI48_RS04220 - transposase, at 888,353 to 888,501 _RS04220 HGI48_RS04225: HGI48_RS04225 - hypothetical protein, at 889,196 to 889,498 _RS04225 HGI48_RS04230: HGI48_RS04230 - dienelactone hydrolase family protein, at 890,083 to 891,261 _RS04230
Group Condition HGI48_RS04210 HGI48_RS04215 HGI48_RS04220 HGI48_RS04225 HGI48_RS04230
plant Atlantic -0.2 -0.4 -0.7 +0.0 +0.0
plant Norland +0.1 -0.1 -0.3 -1.0 +0.0
control PDB -0.0 -0.4 -0.1 -0.5 +0.0
plant Atlantic +0.0 -0.4 -1.0 +0.3 +0.0
plant Norland -0.0 -0.1 +0.0 -0.9 +0.2
plant Norland -0.0 +0.1 +0.0 -0.9 +0.1
carbon source M9+polygalacturonate -0.0 -0.1 +0.3 -0.5 -0.4
control LB +0.1 -0.0 -0.1 -0.7 +0.1
control LB +0.1 +0.0 -0.0 -0.7 +0.1
plant Atlantic +0.2 -0.0 -0.6 -0.4 +0.2
carbon source M9+glycerol +0.3 +0.2 +0.1 -1.2 +0.0
control PDB -0.0 -0.0 -0.0 -0.5 +0.0
control PDB +0.0 -0.2 -0.1 -0.2 -0.1
control LB +0.0 -0.0 -0.6 +0.1 -0.0
plant Norland -0.0 -0.1 +0.1 -0.4 -0.0
carbon source M9+polygalacturonate -0.2 +0.1 +0.2 -0.6 +0.1
plant Atlantic -0.0 -0.0 -0.3 +0.1 -0.2
carbon source M9+glycerol +0.0 -0.0 +0.1 -0.7 +0.2
carbon source M9+sucrose -0.1 -0.1 -0.5 +0.5 -0.2
plant Upstate -0.0 -0.1 +0.3 -0.6 +0.1
plant Atlantic -0.1 +0.2 +0.0 -0.3 -0.0
control PDB +0.2 +0.0 -0.6 +0.2 +0.0
plant Norland +0.0 +0.1 +0.0 -0.3 +0.1
plant Atlantic -0.3 -0.1 +0.4 +0.1 -0.0
control PDB +0.0 +0.0 -0.3 +0.4 +0.1
carbon source M9+sucrose -0.1 +0.1 +0.3 +0.1 -0.1
carbon source M9+glycerol +0.2 +0.4 +0.2 -0.4 +0.1
carbon source M9+glycerol +0.2 +0.2 +0.2 -0.2 +0.2
plant Upstate +0.1 +0.2 +0.1 +0.6 -0.2
carbon source M9+polygalacturonate +0.2 -0.1 +0.7 +0.4 -0.1
remove
HGI48_RS04210
plot
remove
HGI48_RS04215
plot
remove
HGI48_RS04220
remove
HGI48_RS04225
plot
remove
HGI48_RS04230
plot