Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS04200 and HGI48_RS04205 are separated by 86 nucleotidesHGI48_RS04205 and HGI48_RS04210 are separated by 452 nucleotidesHGI48_RS04210 and HGI48_RS04215 overlap by 17 nucleotidesHGI48_RS04215 and HGI48_RS04220 are separated by 138 nucleotides HGI48_RS04200: HGI48_RS04200 - IS21 family transposase, at 885,007 to 886,030 _RS04200 HGI48_RS04205: HGI48_RS04205 - integrase arm-type DNA-binding domain-containing protein, at 886,117 to 886,315 _RS04205 HGI48_RS04210: HGI48_RS04210 - type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein, at 886,768 to 887,313 _RS04210 HGI48_RS04215: HGI48_RS04215 - nucleotidyl transferase AbiEii/AbiGii toxin family protein, at 887,297 to 888,214 _RS04215 HGI48_RS04220: HGI48_RS04220 - transposase, at 888,353 to 888,501 _RS04220
Group Condition HGI48_RS04200 HGI48_RS04205 HGI48_RS04210 HGI48_RS04215 HGI48_RS04220
plant Atlantic N.D. -0.2 +0.0 -0.4 -1.0
plant Atlantic N.D. -0.1 -0.2 -0.4 -0.7
control PDB N.D. -0.3 -0.0 -0.4 -0.1
control LB N.D. -0.2 +0.0 -0.0 -0.6
control LB N.D. -0.3 -0.1 -0.0 -0.2
control PDB N.D. -0.2 +0.2 +0.0 -0.6
carbon source M9+sucrose N.D. +0.3 -0.1 -0.1 -0.5
plant Norland N.D. -0.3 -0.0 +0.1 +0.0
plant Norland N.D. -0.2 -0.0 -0.1 +0.1
plant Atlantic N.D. +0.2 +0.2 -0.0 -0.6
plant Norland N.D. +0.1 +0.1 -0.1 -0.3
carbon source M9+glycerol N.D. -0.4 +0.0 -0.0 +0.1
plant Upstate N.D. -0.3 +0.2 +0.0 -0.1
control LB N.D. -0.1 +0.1 -0.0 -0.1
control PDB N.D. +0.2 +0.0 -0.2 -0.1
control PDB N.D. +0.2 +0.0 +0.0 -0.3
plant Norland N.D. +0.2 +0.1 +0.0 -0.3
plant Upstate N.D. -0.1 -0.0 -0.1 +0.3
plant Upstate N.D. -0.4 +0.1 +0.2 +0.1
plant Atlantic N.D. +0.5 -0.0 -0.0 -0.3
carbon source M9+sucrose N.D. -0.1 -0.1 +0.1 +0.3
plant Atlantic N.D. +0.3 -0.3 -0.1 +0.4
control PDB N.D. +0.4 -0.0 -0.0 -0.0
carbon source M9+glycerol N.D. -0.3 +0.3 +0.2 +0.1
carbon source M9+glycerol N.D. -0.1 +0.2 +0.2 +0.0
carbon source M9+sucrose N.D. +0.1 +0.0 +0.2 +0.0
carbon source M9+glycerol N.D. -0.1 +0.2 +0.2 +0.2
carbon source M9+polygalacturonate N.D. -0.1 +0.2 -0.1 +0.7
carbon source M9+glycerol N.D. -0.1 +0.2 +0.4 +0.2
carbon source M9+polygalacturonate N.D. +0.8 -0.2 +0.1 +0.2
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HGI48_RS04200
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