Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS03945 and HGI48_RS03950 are separated by 25 nucleotidesHGI48_RS03950 and HGI48_RS03955 are separated by 57 nucleotidesHGI48_RS03955 and HGI48_RS03960 are separated by 14 nucleotidesHGI48_RS03960 and HGI48_RS03965 are separated by 58 nucleotides HGI48_RS03945: HGI48_RS03945 - LysR family transcriptional regulator, at 837,328 to 838,272 _RS03945 HGI48_RS03950: HGI48_RS03950 - DUF2867 domain-containing protein, at 838,298 to 838,834 _RS03950 HGI48_RS03955: HGI48_RS03955 - arginase family protein, at 838,892 to 839,770 _RS03955 HGI48_RS03960: HGI48_RS03960 - alkene reductase, at 839,785 to 840,867 _RS03960 HGI48_RS03965: HGI48_RS03965 - MFS transporter, at 840,926 to 842,113 _RS03965
Group Condition HGI48_RS03945 HGI48_RS03950 HGI48_RS03955 HGI48_RS03960 HGI48_RS03965
plant Atlantic -0.5 -0.9 -0.2 +0.0 -0.1
control LB -0.1 -0.3 -0.1 -0.2 -0.1
plant Upstate -0.2 -0.3 -0.2 -0.2 +0.2
plant Upstate -0.2 -0.2 -0.1 -0.3 +0.1
plant Norland -0.1 +0.0 -0.1 -0.2 -0.3
carbon source M9+glycerol +0.1 -0.3 -0.4 +0.3 -0.2
carbon source M9+glycerol +0.1 -0.2 -0.4 -0.0 +0.2
plant Upstate -0.1 +0.1 -0.0 -0.3 -0.1
control PDB +0.1 -0.3 -0.3 +0.3 +0.0
plant Norland +0.2 -0.3 -0.4 +0.0 +0.2
control PDB +0.0 -0.2 -0.5 +0.3 +0.1
carbon source M9+glycerol +0.2 -0.1 -0.4 +0.1 -0.0
carbon source M9+glycerol -0.2 +0.1 -0.1 -0.1 +0.2
control LB +0.2 -0.2 -0.1 -0.1 +0.2
control LB +0.2 -0.2 -0.1 -0.0 +0.1
control LB +0.1 -0.1 -0.2 +0.2 +0.2
plant Norland -0.1 -0.1 +0.2 +0.2 -0.1
plant Upstate +0.3 -0.1 -0.1 +0.2 -0.2
control PDB -0.1 -0.1 +0.1 +0.3 -0.0
plant Atlantic +0.1 -0.1 +0.1 +0.1 +0.1
carbon source M9+polygalacturonate +0.2 -0.0 +0.1 +0.2 -0.1
carbon source M9+polygalacturonate +0.5 +0.3 -0.4 +0.1 -0.0
plant Norland -0.1 +0.0 +0.1 +0.2 +0.3
plant Atlantic +0.0 -0.1 -0.3 +0.3 +0.5
carbon source M9+sucrose +0.5 +0.1 -0.0 +0.1 -0.2
carbon source M9+polygalacturonate +0.4 +0.1 +0.1 -0.1 +0.2
carbon source M9+sucrose +0.0 +0.3 -0.1 +0.4 +0.0
control PDB +0.4 +0.1 -0.2 +0.2 +0.2
carbon source M9+sucrose +0.2 +0.0 +0.1 +0.4 +0.2
plant Atlantic +0.2 +0.3 +0.5 +0.5 +0.1
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