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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS03595 and HGI48_RS03600 are separated by 80 nucleotides
HGI48_RS03600 and HGI48_RS03605 are separated by 88 nucleotides
HGI48_RS03605 and HGI48_RS03610 overlap by 4 nucleotides
HGI48_RS03610 and HGI48_RS03615 overlap by 8 nucleotides
HGI48_RS03595: HGI48_RS03595 - enolase, at 760,901 to 762,055
_RS03595
HGI48_RS03600: HGI48_RS03600 - ABC transporter substrate-binding protein, at 762,136 to 763,746
_RS03600
HGI48_RS03605: HGI48_RS03605 - ABC transporter permease, at 763,835 to 764,893
_RS03605
HGI48_RS03610: HGI48_RS03610 - ABC transporter permease, at 764,890 to 765,795
_RS03610
HGI48_RS03615: HGI48_RS03615 - ABC transporter ATP-binding protein, at 765,788 to 766,663
_RS03615
Group
Condition
HGI48
_RS03595
HGI48
_RS03600
HGI48
_RS03605
HGI48
_RS03610
HGI48
_RS03615
plant
Atlantic
N.D.
-0.1
-0.1
-0.6
-0.6
plant
Atlantic
N.D.
+0.1
-0.2
-0.4
-0.5
plant
Upstate
N.D.
-0.4
-0.1
-0.3
-0.1
carbon source
M9+glycerol
N.D.
-0.1
-0.2
-0.5
-0.1
carbon source
M9+polygalacturonate
N.D.
+0.1
-0.2
-0.0
-0.7
carbon source
M9+glycerol
N.D.
-0.5
+0.0
-0.4
+0.1
plant
Atlantic
N.D.
-0.3
-0.1
-0.3
-0.1
control
PDB
N.D.
-0.4
+0.0
-0.2
-0.2
plant
Norland
N.D.
-0.1
-0.3
+0.0
-0.2
plant
Atlantic
N.D.
-0.2
-0.1
-0.2
+0.1
plant
Upstate
N.D.
-0.2
-0.0
-0.3
+0.1
control
PDB
N.D.
-0.4
-0.0
-0.2
+0.4
plant
Atlantic
N.D.
-0.4
+0.4
-0.1
-0.1
plant
Atlantic
N.D.
-0.3
+0.1
-0.2
+0.2
plant
Norland
N.D.
+0.0
-0.2
-0.2
+0.3
carbon source
M9+sucrose
N.D.
-0.3
-0.1
+0.3
-0.1
plant
Upstate
N.D.
-0.5
-0.0
+0.0
+0.3
plant
Upstate
N.D.
-0.1
-0.2
+0.0
+0.2
control
PDB
N.D.
-0.3
-0.1
+0.0
+0.3
control
LB
N.D.
-0.3
+0.0
+0.2
+0.1
control
PDB
N.D.
-0.4
-0.2
+0.2
+0.4
control
LB
N.D.
-0.1
-0.0
-0.1
+0.4
plant
Upstate
N.D.
-0.4
-0.1
+0.5
+0.2
control
LB
N.D.
-0.1
+0.1
-0.0
+0.3
plant
Norland
N.D.
-0.2
-0.2
-0.1
+0.7
control
PDB
N.D.
-0.2
+0.1
+0.1
+0.3
control
LB
N.D.
-0.1
-0.0
+0.4
+0.2
carbon source
M9+polygalacturonate
N.D.
+0.1
-0.2
+0.4
+0.2
carbon source
M9+sucrose
N.D.
-0.0
-0.1
+0.1
+0.6
carbon source
M9+glycerol
N.D.
-0.0
+0.1
+0.4
+0.2
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