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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS03065 and HGI48_RS03070 are separated by 59 nucleotides
HGI48_RS03070 and HGI48_RS03075 are separated by 14 nucleotides
HGI48_RS03075 and HGI48_RS03080 overlap by 8 nucleotides
HGI48_RS03080 and HGI48_RS03085 overlap by 4 nucleotides
HGI48_RS03065: HGI48_RS03065 - phage major tail tube protein, at 652,474 to 652,989
_RS03065
HGI48_RS03070: HGI48_RS03070 - phage tail assembly protein, at 653,049 to 653,351
_RS03070
HGI48_RS03075: HGI48_RS03075 - GpE family phage tail protein, at 653,366 to 653,485
_RS03075
HGI48_RS03080: HGI48_RS03080 - phage tail tape measure protein, at 653,478 to 656,318
_RS03080
HGI48_RS03085: HGI48_RS03085 - phage tail protein, at 656,315 to 656,848
_RS03085
Group
Condition
HGI48
_RS03065
HGI48
_RS03070
HGI48
_RS03075
HGI48
_RS03080
HGI48
_RS03085
plant
Atlantic
-0.6
-0.6
N.D.
-0.2
-0.5
carbon source
M9+sucrose
-0.4
-0.7
N.D.
-0.1
-0.3
carbon source
M9+glycerol
-0.4
-0.5
N.D.
+0.1
-0.1
plant
Upstate
-0.7
-0.1
N.D.
+0.2
-0.1
plant
Norland
-0.2
-0.4
N.D.
-0.0
-0.2
plant
Upstate
-0.7
-0.0
N.D.
-0.1
+0.2
carbon source
M9+glycerol
-0.6
+0.3
N.D.
-0.0
-0.3
plant
Atlantic
-0.2
-0.1
N.D.
+0.1
-0.2
carbon source
M9+sucrose
-0.4
+0.1
N.D.
+0.3
-0.1
plant
Upstate
+0.2
-0.3
N.D.
+0.1
+0.1
plant
Norland
-0.2
+0.4
N.D.
-0.1
-0.0
carbon source
M9+polygalacturonate
-0.2
+0.1
N.D.
+0.2
+0.2
plant
Atlantic
-0.6
+0.7
N.D.
-0.0
+0.2
carbon source
M9+glycerol
-0.5
+0.3
N.D.
+0.3
+0.2
plant
Upstate
+0.0
+0.7
N.D.
-0.1
-0.2
control
LB
-0.2
+0.4
N.D.
+0.0
+0.1
carbon source
M9+glycerol
-0.0
+0.4
N.D.
+0.1
+0.0
plant
Atlantic
+0.7
-0.2
N.D.
-0.0
+0.1
plant
Atlantic
-0.2
+0.6
N.D.
+0.2
+0.0
control
LB
-0.3
+0.6
N.D.
+0.2
+0.1
carbon source
M9+glycerol
-0.1
+0.7
N.D.
+0.1
-0.0
control
PDB
+0.3
+0.5
N.D.
+0.2
-0.2
control
PDB
-0.3
+0.5
N.D.
+0.2
+0.3
control
LB
+0.2
+0.5
N.D.
+0.2
-0.1
control
PDB
-0.1
+0.9
N.D.
+0.2
-0.1
control
PDB
+0.4
+0.4
N.D.
+0.1
+0.1
plant
Norland
+0.2
+0.5
N.D.
+0.2
+0.1
plant
Norland
+0.5
+0.5
N.D.
+0.1
-0.1
control
PDB
+0.1
+0.9
N.D.
+0.2
-0.2
plant
Norland
+0.5
+1.0
N.D.
+0.0
+0.2
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