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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS02685 and HGI48_RS02690 are separated by 114 nucleotides
HGI48_RS02690 and HGI48_RS02695 are separated by 175 nucleotides
HGI48_RS02695 and HGI48_RS02700 are separated by 444 nucleotides
HGI48_RS02700 and HGI48_RS02705 are separated by 187 nucleotides
HGI48_RS02685: HGI48_RS02685 - divalent cation tolerance protein CutA, at 580,131 to 580,514
_RS02685
HGI48_RS02690: HGI48_RS02690 - anaerobic C4-dicarboxylate transporter, at 580,629 to 581,933
_RS02690
HGI48_RS02695: HGI48_RS02695 - aspartate ammonia-lyase, at 582,109 to 583,548
_RS02695
HGI48_RS02700: HGI48_RS02700 - FxsA family protein, at 583,993 to 584,496
_RS02700
HGI48_RS02705: HGI48_RS02705 - co-chaperone GroES, at 584,684 to 584,977
_RS02705
Group
Condition
HGI48
_RS02685
HGI48
_RS02690
HGI48
_RS02695
HGI48
_RS02700
HGI48
_RS02705
control
LB
-0.1
-0.0
-0.3
-0.9
N.D.
control
LB
-0.2
-0.2
-0.4
-0.5
N.D.
control
LB
+0.0
-0.2
-0.3
-0.6
N.D.
plant
Upstate
-0.3
-0.2
-0.0
-0.5
N.D.
plant
Atlantic
-0.0
-0.2
-0.2
-0.6
N.D.
control
PDB
-0.1
-0.2
-0.1
-0.4
N.D.
plant
Atlantic
+0.2
-0.1
+0.2
-1.3
N.D.
control
PDB
+0.2
-0.2
-0.1
-0.7
N.D.
carbon source
M9+glycerol
+0.3
-0.2
-0.1
-0.9
N.D.
carbon source
M9+glycerol
+0.0
-0.2
-0.4
-0.3
N.D.
plant
Norland
-0.1
-0.1
-0.1
-0.5
N.D.
plant
Atlantic
-0.1
-0.3
-0.0
-0.4
N.D.
carbon source
M9+sucrose
-0.2
+0.3
-0.3
-0.4
N.D.
plant
Atlantic
+0.3
-0.2
+0.1
-0.9
N.D.
control
LB
+0.1
-0.1
-0.4
-0.3
N.D.
plant
Upstate
-0.0
-0.1
+0.2
-0.8
N.D.
control
PDB
+0.0
-0.1
-0.2
-0.3
N.D.
control
PDB
+0.2
-0.2
-0.5
-0.1
N.D.
plant
Atlantic
-0.3
-0.2
+0.2
-0.2
N.D.
carbon source
M9+sucrose
-0.5
+0.1
-0.3
+0.2
N.D.
carbon source
M9+glycerol
+0.4
-0.4
+0.1
-0.5
N.D.
carbon source
M9+glycerol
-0.2
-0.1
-0.4
+0.3
N.D.
plant
Upstate
+0.2
-0.5
+0.1
-0.1
N.D.
plant
Atlantic
+0.3
-0.1
-0.1
-0.2
N.D.
control
PDB
+0.3
-0.2
+0.1
-0.2
N.D.
carbon source
M9+glycerol
+0.3
-0.4
+0.0
+0.0
N.D.
plant
Norland
+0.3
-0.4
+0.2
-0.1
N.D.
carbon source
M9+sucrose
-0.3
-0.2
-0.2
+0.9
N.D.
plant
Norland
+0.2
-0.0
+0.5
-0.4
N.D.
plant
Upstate
+0.3
-0.1
+0.3
+0.7
N.D.
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