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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS02630 and HGI48_RS02635 are separated by 1 nucleotides
HGI48_RS02635 and HGI48_RS02640 are separated by 18 nucleotides
HGI48_RS02640 and HGI48_RS02645 are separated by 38 nucleotides
HGI48_RS02645 and HGI48_RS02650 are separated by 26 nucleotides
HGI48_RS02630: HGI48_RS02630 - glycosyltransferase family 4 protein, at 570,769 to 571,980
_RS02630
HGI48_RS02635: HGI48_RS02635 - glycosyltransferase family 4 protein, at 571,982 to 573,094
_RS02635
HGI48_RS02640: HGI48_RS02640 - hypothetical protein, at 573,113 to 573,520
_RS02640
HGI48_RS02645: HGI48_RS02645 - DUF4832 domain-containing protein, at 573,559 to 574,953
_RS02645
HGI48_RS02650: HGI48_RS02650 - serine acetyltransferase, at 574,980 to 575,480
_RS02650
Group
Condition
HGI48
_RS02630
HGI48
_RS02635
HGI48
_RS02640
HGI48
_RS02645
HGI48
_RS02650
control
PDB
-0.1
-0.1
-0.1
-0.2
-0.4
control
PDB
-0.3
-0.3
-0.0
+0.0
-0.2
control
PDB
-0.4
+0.1
-0.2
-0.0
-0.2
carbon source
M9+sucrose
-0.1
-0.3
-0.0
-0.2
+0.1
carbon source
M9+polygalacturonate
+0.1
-0.4
-0.1
-0.3
+0.1
carbon source
M9+glycerol
-0.3
+0.4
+0.1
-0.2
-0.5
carbon source
M9+sucrose
-0.1
-0.2
+0.1
-0.3
+0.2
carbon source
M9+sucrose
-0.2
+0.0
-0.0
-0.2
+0.2
carbon source
M9+glycerol
+0.1
+0.2
-0.2
-0.2
+0.1
plant
Upstate
+0.2
+0.1
+0.1
-0.1
-0.2
control
PDB
+0.2
-0.0
+0.1
+0.1
-0.3
carbon source
M9+glycerol
-0.2
+0.1
+0.0
-0.2
+0.4
carbon source
M9+glycerol
+0.1
+0.3
-0.1
-0.2
+0.1
plant
Norland
-0.1
+0.0
+0.1
-0.1
+0.3
carbon source
M9+glycerol
+0.1
+0.2
+0.2
-0.1
-0.2
carbon source
M9+polygalacturonate
+0.2
+0.1
-0.0
-0.2
+0.2
carbon source
M9+glycerol
-0.0
-0.0
+0.2
-0.1
+0.3
plant
Upstate
+0.1
+0.3
-0.0
-0.0
+0.2
plant
Upstate
+0.2
+0.2
+0.2
+0.0
-0.1
plant
Norland
+0.0
+0.3
-0.0
+0.0
+0.3
plant
Norland
-0.1
+0.1
+0.3
+0.1
+0.2
plant
Norland
+0.1
+0.2
+0.2
+0.0
+0.0
plant
Atlantic
+0.1
-0.1
+0.4
+0.3
-0.0
control
LB
+0.1
+0.2
+0.2
+0.1
+0.1
control
LB
+0.1
+0.3
+0.2
+0.1
+0.2
plant
Upstate
+0.4
-0.1
+0.4
+0.1
+0.2
plant
Norland
+0.4
+0.0
+0.1
+0.1
+0.3
plant
Atlantic
+0.3
+0.0
+0.3
+0.1
+0.3
plant
Atlantic
+0.1
-0.1
+0.5
+0.3
+0.4
plant
Atlantic
+0.6
+0.2
+0.1
+0.1
+0.2
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