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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS01970 and HGI48_RS01975 are separated by 218 nucleotides
HGI48_RS01975 and HGI48_RS01980 are separated by 175 nucleotides
HGI48_RS01980 and HGI48_RS01985 are separated by 99 nucleotides
HGI48_RS01985 and HGI48_RS01990 are separated by 118 nucleotides
HGI48_RS01970: HGI48_RS01970 - tRNA-Leu, at 437,853 to 437,937
_RS01970
HGI48_RS01975: HGI48_RS01975 - integrase arm-type DNA-binding domain-containing protein, at 438,156 to 439,412
_RS01975
HGI48_RS01980: HGI48_RS01980 - hypothetical protein, at 439,588 to 440,409
_RS01980
HGI48_RS01985: HGI48_RS01985 - helix-turn-helix transcriptional regulator, at 440,509 to 440,763
_RS01985
HGI48_RS01990: HGI48_RS01990 - helix-turn-helix domain-containing protein, at 440,882 to 441,172
_RS01990
Group
Condition
HGI48
_RS01970
HGI48
_RS01975
HGI48
_RS01980
HGI48
_RS01985
HGI48
_RS01990
carbon source
M9+polygalacturonate
N.D.
-0.1
-0.5
+0.1
-1.1
control
PDB
N.D.
+0.2
+0.0
+1.3
-0.8
control
PDB
N.D.
-0.1
-0.2
+1.2
-0.1
control
PDB
N.D.
-0.3
-0.8
+1.7
+0.4
control
PDB
N.D.
-0.1
-0.1
+1.3
+0.1
control
PDB
N.D.
+0.0
-0.5
+1.4
+0.5
control
PDB
N.D.
-0.1
+0.2
+1.2
+0.3
carbon source
M9+glycerol
N.D.
-0.4
-0.3
+2.9
+0.1
carbon source
M9+glycerol
N.D.
-0.1
+0.5
+1.7
+0.2
carbon source
M9+glycerol
N.D.
-0.1
+0.1
+2.9
+0.1
carbon source
M9+glycerol
N.D.
-0.6
+0.3
+3.0
+0.4
carbon source
M9+glycerol
N.D.
-0.0
+0.3
+2.9
-0.0
carbon source
M9+glycerol
N.D.
-0.1
+0.0
+2.8
+0.5
plant
Norland
N.D.
-0.3
-0.0
+3.6
+0.4
plant
Upstate
N.D.
-0.3
-0.2
+4.3
+0.0
plant
Upstate
N.D.
+0.0
-0.3
+3.9
+0.2
plant
Atlantic
N.D.
+0.3
+0.1
+3.5
+0.1
plant
Upstate
N.D.
-0.2
+0.4
+3.9
+0.0
plant
Upstate
N.D.
-0.2
+0.5
+3.5
+0.3
plant
Norland
N.D.
+0.0
+0.1
+4.3
-0.1
plant
Norland
N.D.
+0.0
+0.4
+3.9
+0.2
plant
Atlantic
N.D.
+0.1
+0.0
+4.1
+0.4
plant
Upstate
N.D.
-0.0
+0.2
+4.2
+0.6
plant
Norland
N.D.
-0.1
+0.6
+4.5
+0.2
plant
Atlantic
N.D.
-0.1
-0.3
+5.9
+0.3
plant
Atlantic
N.D.
-0.5
+0.1
+6.0
+0.3
plant
Norland
N.D.
-0.4
-0.5
+6.8
-0.0
plant
Norland
N.D.
-0.2
+0.0
+5.8
+0.3
plant
Atlantic
N.D.
-0.2
-0.0
+4.6
+1.5
plant
Atlantic
N.D.
+0.0
+0.5
+6.1
+0.1
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