Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS01605 and HGI48_RS01610 are separated by 59 nucleotidesHGI48_RS01610 and HGI48_RS01620 are separated by 599 nucleotidesHGI48_RS01620 and HGI48_RS01625 are separated by 170 nucleotidesHGI48_RS01625 and HGI48_RS01630 are separated by 11 nucleotides HGI48_RS01605: HGI48_RS01605 - penicillin-binding protein activator, at 353,723 to 355,756 _RS01605 HGI48_RS01610: HGI48_RS01610 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 355,816 to 356,685 _RS01610 HGI48_RS01620: HGI48_RS01620 - 4,5-DOPA dioxygenase extradiol, at 357,285 to 358,073 _RS01620 HGI48_RS01625: HGI48_RS01625 - glutathionylspermidine synthase family protein, at 358,244 to 359,404 _RS01625 HGI48_RS01630: HGI48_RS01630 - DUF1190 family protein, at 359,416 to 360,168 _RS01630
Group Condition HGI48_RS01605 HGI48_RS01610 HGI48_RS01620 HGI48_RS01625 HGI48_RS01630
carbon source M9+sucrose -0.2 -0.6 -0.0 -0.0 +0.2
carbon source M9+sucrose -0.4 -0.6 +0.4 +0.1 -0.1
plant Upstate -0.1 -0.2 +0.0 -0.2 -0.0
plant Upstate -0.1 +0.1 -0.3 +0.1 -0.3
plant Atlantic -0.4 +0.0 -0.1 -0.1 +0.1
carbon source M9+polygalacturonate -0.1 +0.2 -0.4 +0.0 -0.2
carbon source M9+glycerol +0.2 +0.1 -0.0 -0.2 -0.2
control LB +0.0 -0.2 +0.1 -0.2 +0.2
plant Norland +0.1 +0.3 -0.4 -0.0 -0.2
carbon source M9+sucrose -0.0 -0.5 -0.1 +0.4 +0.1
carbon source M9+glycerol +0.6 -0.0 -0.3 -0.3 +0.1
control PDB +0.2 -0.1 -0.2 -0.0 +0.2
carbon source M9+polygalacturonate +0.2 +0.4 -0.5 +0.0 +0.0
plant Atlantic +0.2 +0.1 -0.3 +0.3 -0.2
plant Upstate -0.2 +0.0 +0.1 -0.1 +0.3
plant Atlantic -0.1 -0.2 +0.1 +0.2 +0.2
plant Norland -0.0 +0.0 -0.2 +0.2 +0.3
plant Atlantic -0.1 +0.2 +0.3 +0.2 -0.3
control PDB +0.2 -0.0 -0.1 -0.0 +0.2
plant Upstate +0.0 -0.0 +0.3 -0.1 +0.1
plant Upstate +0.2 -0.1 +0.1 -0.0 +0.3
control PDB +0.2 -0.2 -0.0 +0.1 +0.3
carbon source M9+glycerol +0.5 -0.0 -0.1 -0.2 +0.4
control PDB +0.3 +0.1 -0.2 +0.0 +0.4
control PDB -0.1 +0.0 +0.2 +0.1 +0.5
carbon source M9+polygalacturonate -0.1 +0.5 +0.3 +0.1 -0.1
plant Atlantic +0.2 +0.3 +0.2 +0.1 -0.0
carbon source M9+glycerol +0.9 +0.3 -0.3 +0.2 -0.1
carbon source M9+glycerol +0.7 +0.2 -0.0 +0.1 +0.1
carbon source M9+glycerol +0.9 +0.3 -0.1 -0.0 +0.2
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