Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS01590 and HGI48_RS01595 are separated by 10 nucleotidesHGI48_RS01595 and HGI48_RS01600 are separated by 37 nucleotidesHGI48_RS01600 and HGI48_RS01605 overlap by 4 nucleotidesHGI48_RS01605 and HGI48_RS01610 are separated by 59 nucleotides HGI48_RS01590: HGI48_RS01590 - divisome-associated lipoprotein YraP, at 352,156 to 352,731 _RS01590 HGI48_RS01595: HGI48_RS01595 - DnaA initiator-associating protein DiaA, at 352,742 to 353,332 _RS01595 HGI48_RS01600: HGI48_RS01600 - YraN family protein, at 353,370 to 353,726 _RS01600 HGI48_RS01605: HGI48_RS01605 - penicillin-binding protein activator, at 353,723 to 355,756 _RS01605 HGI48_RS01610: HGI48_RS01610 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 355,816 to 356,685 _RS01610
Group Condition HGI48_RS01590 HGI48_RS01595 HGI48_RS01600 HGI48_RS01605 HGI48_RS01610
plant Atlantic -3.3 +0.1 -0.0 +0.2 +0.1
plant Upstate -1.1 +0.2 -0.6 -0.2 +0.0
control LB -0.9 +0.1 -0.3 +0.0 -0.2
carbon source M9+sucrose -1.1 +1.1 -0.6 -0.0 -0.5
plant Upstate -0.6 +0.4 -0.5 -0.1 -0.2
plant Norland -1.3 +0.5 -0.6 +0.1 +0.3
plant Norland -0.7 +0.5 -0.4 -0.0 -0.1
plant Upstate -1.2 +0.3 +0.3 +0.0 -0.0
carbon source M9+sucrose -0.7 +1.1 +0.2 -0.2 -0.6
plant Norland -1.2 +0.4 +0.3 +0.2 +0.0
control PDB -1.3 +1.0 +0.0 +0.2 -0.1
plant Atlantic -1.6 +0.7 +0.7 +0.1 +0.1
plant Upstate -0.6 +0.6 +0.4 -0.1 +0.1
carbon source M9+sucrose +0.4 +1.2 +0.1 -0.4 -0.6
control PDB +0.1 +0.9 -0.3 +0.2 -0.0
plant Atlantic +0.3 +0.9 +0.2 -0.1 -0.2
carbon source M9+glycerol +0.6 +0.1 -0.4 +0.7 +0.2
control PDB -0.2 +1.3 +0.1 +0.2 -0.0
control PDB +0.2 +1.3 -0.1 +0.2 -0.2
plant Atlantic -0.3 +0.7 +0.7 +0.2 +0.3
control PDB +0.2 +1.4 -0.4 +0.3 +0.1
carbon source M9+polygalacturonate +0.7 +0.8 +0.0 -0.1 +0.2
carbon source M9+polygalacturonate +0.2 +1.3 -0.2 +0.2 +0.4
control PDB +0.5 +1.4 -0.1 -0.1 +0.0
carbon source M9+glycerol +1.3 +1.0 -0.3 +0.2 +0.1
carbon source M9+polygalacturonate +0.8 +1.2 +0.2 -0.1 +0.5
carbon source M9+glycerol +3.4 +0.4 -0.5 +0.5 -0.0
carbon source M9+glycerol +1.9 +0.9 +0.0 +0.9 +0.3
carbon source M9+glycerol +3.3 +0.3 +0.0 +0.9 +0.3
carbon source M9+glycerol +5.3 +0.7 -0.7 +0.6 -0.0
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