Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS01565 and HGI48_RS01570 are separated by 93 nucleotidesHGI48_RS01570 and HGI48_RS01575 are separated by 235 nucleotidesHGI48_RS01575 and HGI48_RS01580 overlap by 4 nucleotidesHGI48_RS01580 and HGI48_RS01585 are separated by 93 nucleotides HGI48_RS01565: HGI48_RS01565 - TIGR01212 family radical SAM protein, at 345,618 to 346,547 _RS01565 HGI48_RS01570: HGI48_RS01570 - aerobic respiration two-component sensor histidine kinase ArcB, at 346,641 to 348,980 _RS01570 HGI48_RS01575: HGI48_RS01575 - isoprenoid biosynthesis glyoxalase ElbB, at 349,216 to 349,869 _RS01575 HGI48_RS01580: HGI48_RS01580 - monofunctional biosynthetic peptidoglycan transglycosylase, at 349,866 to 350,615 _RS01580 HGI48_RS01585: HGI48_RS01585 - alginate lyase family protein, at 350,709 to 352,010 _RS01585
Group Condition HGI48_RS01565 HGI48_RS01570 HGI48_RS01575 HGI48_RS01580 HGI48_RS01585
control LB -0.0 -0.8 -0.1 -0.5 +0.0
control PDB -0.1 -0.3 -0.4 -0.1 -0.2
control PDB -0.2 -0.6 -0.1 -0.3 +0.1
control PDB -0.1 -0.5 -0.0 -0.6 +0.2
control PDB +0.0 -0.6 -0.2 -0.3 +0.1
control PDB +0.1 -0.4 -0.3 -0.2 +0.3
carbon source M9+glycerol +0.1 +0.2 -0.3 -0.2 -0.2
control LB +0.2 -0.3 -0.2 +0.1 +0.0
carbon source M9+glycerol -0.1 +0.6 -0.7 -0.2 +0.2
control LB +0.4 -0.5 -0.1 +0.1 +0.1
plant Upstate +0.2 +0.2 +0.1 -0.4 -0.0
carbon source M9+sucrose -0.1 +1.0 -0.5 -0.2 +0.1
plant Atlantic -0.3 +0.6 -0.2 +0.1 +0.1
plant Norland -0.0 +0.8 -0.3 -0.1 +0.0
plant Norland +0.1 +0.6 -0.1 -0.2 -0.1
carbon source M9+sucrose +0.0 +0.5 -0.2 +0.2 -0.0
carbon source M9+glycerol +0.1 +0.7 -0.3 -0.0 +0.0
plant Atlantic +0.1 +0.5 -0.0 -0.2 +0.1
plant Norland +0.2 +0.4 -0.2 +0.1 +0.1
plant Upstate +0.2 +0.5 -0.2 +0.1 +0.0
carbon source M9+polygalacturonate -0.2 +0.6 +0.0 +0.2 +0.1
plant Upstate +0.2 +0.3 -0.1 +0.0 +0.2
carbon source M9+sucrose -0.3 +0.8 +0.0 +0.1 +0.1
plant Norland +0.2 +0.3 -0.2 +0.2 +0.2
carbon source M9+glycerol +0.4 +0.5 -0.0 -0.1 -0.1
plant Atlantic +0.3 +0.7 -0.1 +0.0 +0.0
plant Atlantic +0.2 +0.7 -0.0 -0.1 +0.1
plant Atlantic +0.1 +0.9 +0.1 -0.3 +0.2
plant Upstate +0.6 +0.5 -0.1 -0.2 +0.1
plant Atlantic +0.1 +0.7 -0.0 +0.1 +0.2
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